Transcript Information: S_Transcript_163408.p2


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeOrtholog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value2E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2068915460136
Replicate 24.3166327395138
Replicate 31.8041807038305
Condition 2: 8 Hour
Replicate 13.0133703708992
Replicate 22.6748949460543
Replicate 33.9387979270074
Condition 3: 24 Hour
Replicate 12.3744438576733
Replicate 25.1732613380793
Replicate 34.1122898486602


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163408.p2 GENE.S_Transcript_163408~~S_Transcript_163408.p2 ORF type:complete len:92 (-),score=22.32,RPE65|PF03055.11|4.1e-20 S_Transcript_163408:231-506(-)
ATGTTTGGGCCAGGGTGCTATGGAGGTGAGCCGTTTTTCGTGGCGAGAGATCCAGATGATCTTGGTGCTGAGGAGGATGATGGGTATCTTGTGACTTTTATACATGATGAGAAAACAAGGCAATCCAGGTTCATTGTGATGGATGCTAAGTCAAGTAGTCTTGACATTGTTGCTTCCGTGAAGCTACCTCAACGGGTGCCCTACGGTATTCATGGATTGTTTGTTAAAGACAAGGATCTTCAAACATTGTGGGACACCGACACCACTTCAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163408.p2 GENE.S_Transcript_163408~~S_Transcript_163408.p2 ORF type:complete len:92 (-),score=22.32,RPE65|PF03055.11|4.1e-20 S_Transcript_163408:231-506(-)
MFGPGCYGGEPFFVARDPDDLGAEEDDGYLVTFIHDEKTRQSRFIVMDAKSSSLDIVASVKLPQRVPYGIHGLFVKDKDLQTLWDTDTTSN*

Click here to download the sequence:
Link to NCBI Protein BLAST