Transcript Information: S_Transcript_163410.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeHomolog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value4E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.99674161929515
Replicate 21.6526434125479
Replicate 30.27629567166443
Condition 2: 8 Hour
Replicate 11.6772778901116
Replicate 20.75410725751887
Replicate 32.5547083271888
Condition 3: 24 Hour
Replicate 10.7363443873234
Replicate 20.7639487048207
Replicate 30.56678751472171


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163410.p1 GENE.S_Transcript_163410~~S_Transcript_163410.p1 ORF type:5prime_partial len:267 (-),score=18.49,RPE65|PF03055.11|7.9e-48 S_Transcript_163410:7-807(-)
GGCCCCAACCCACAATTTTTACCACACGGACCCTATCAATTGTTTGACGGCGATGGGATGCTACATAGCATCCGTATATCAAATGGCAAGGCCACTTTTTGTAGCCGCTTTGTCAAGACATACAAGTACATGGCTGAGCACGAAGCAGGAAGCAATATCATCCCCAACATATTTGGTGGTGTCAATGGCCTCATAGGCTTTGTAGCTCGAACAATTTTGATGGTTGCTAAGATTATTGCCGGTTCCAAGTATGACATGAGTAATGGTTTTGGAGTGGCCAACACCAGCTTAGCCTTGTTCGGAAATCGACTATATGCTCTATGTGAATCAGATCTTCCTTATGAGATAAGCTTAACCCAAACAGGGGACATCGAAACCCTTGGTCGCTCTAACTTCGATGACAAACTCTTTATAAGAATGACGGCTCACCCAAAGATTGATCCTGACACAGGCGAGGCGTTTGCCTTCTACTATGATCTTATGCCTCCGTTTCTCTCCTATTTCAGATTCGACTCCAAAGGAAACAAACACAAGGATTTGCCTATTTTCTCTAAGGCACATCCCTCGTTTCTACACGATTTTGCTGTCACAAGAAATTATGCAATCTTCGCGGACATCCAGATTGAAATAGACCCTATGAAGATGATCCTAAAAGGAGGAGGTATATTGCGTTATGAATCAGAAAAGGTATCGAGACTTGGAGTCATTCCGAAGAATGCCAGCGATGAGAAGGACATGAGGTGGTTTGAAGTACCCCGACTTAAGTCACGCCATCAATGCGTGGGAAGAAATGGAACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163410.p1 GENE.S_Transcript_163410~~S_Transcript_163410.p1 ORF type:5prime_partial len:267 (-),score=18.49,RPE65|PF03055.11|7.9e-48 S_Transcript_163410:7-807(-)
GPNPQFLPHGPYQLFDGDGMLHSIRISNGKATFCSRFVKTYKYMAEHEAGSNIIPNIFGGVNGLIGFVARTILMVAKIIAGSKYDMSNGFGVANTSLALFGNRLYALCESDLPYEISLTQTGDIETLGRSNFDDKLFIRMTAHPKIDPDTGEAFAFYYDLMPPFLSYFRFDSKGNKHKDLPIFSKAHPSFLHDFAVTRNYAIFADIQIEIDPMKMILKGGGILRYESEKVSRLGVIPKNASDEKDMRWFEVPRLKSRHQCVGRNGT*

Click here to download the sequence:
Link to NCBI Protein BLAST