Transcript Information: S_Transcript_163538.p1


Annotated TAIR IDAT3G46290.1
Annotated Gene Namehercules receptor kinase 1
Annotated Gene Symbol(s)HERK1
Annotation TypeOrtholog
Chromosome Positionchr3:17013009-17015501 | Forward length=830
E-Value2.5E-174
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.560238093511
Replicate 22.3459168643434
Replicate 31.4940950751271
Condition 2: 8 Hour
Replicate 12.6454281659228
Replicate 24.2478193619734
Replicate 32.536316044137
Condition 3: 24 Hour
Replicate 11.4931945677115
Replicate 21.3196649778633
Replicate 32.2348646941242


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163538.p1 GENE.S_Transcript_163538~~S_Transcript_163538.p1 ORF type:5prime_partial len:395 (+),score=74.70,Pkinase_Tyr|PF07714.13|2.7e-47,Pkinase|PF00069.21|3.9e-46 S_Transcript_163538:2-1186(+)
GGTCTTATAGTGGGTGTAGCAGTTGGGGCTCTGTCTGTTGTTGTGATTTTGGCTGTAATTGTCTTTCTGGTGTTAAGAAGAAATCGAGCATATCTTGAGGGAAAATCCACTGTCAATGGAGAATTTGGTTACCGTTTCTCTTTTGCTGCCATTCGAGAGGCTACTGATAACTTCAGTGAAAATCTGGTTGTTGGAGTGGGGGGTTTTGGGAAGGTTTACAAGGGAGTGTTGAAGGATGGCAGAAAGGTGGCTATTAAGAGGGGTAACACTGAATCCCAACAGGGTATTAATGAATTTCGAACTGAAATTGAAATGCTATCACACTTTCGCCACCGCCATCTAGTGTCTCTCATAGGATACTGTGATGATCAGAACGAGATGATCTTGTTGTACGAGTACATGGAAAATGGGACACTTAAGAGCCATCTATATGGCTCGAATAACCCCGTCTTGAGCTGGAAACAAAGACTCGAGATATGCATTGGTGCAGCTCGAGGGCTTCACTATCTTCACACAGGTTCTGCAAAACCAATCATTCATCGCGATGTGAAGTCTGCAAATATACTCTTAGACGAAAACCTCATGGCTGAAGTTGCTGATTTTGGTCTGTCAAAAGCTGGTCCTGATCTAGACAAAACCCATGTCACAACTGCTGTAAAAGGAAGTTTCGGTTACCTAGACCCAGAGTATCTAATCAGACAACAGTTGACTGAAAAATCAGATGTTTATTCCTTCGGTGTCGTACTGTTTGAGGTAATCTGTGGGAGGCCTGTAATTGATCCATCACTTCCTCGAGAGATGATAAATTTAGTTGAATGGGCAATGAAGGTTCAGAGAAAAGGAGAATTCGAGAGGATTATTGATCCCAATCTTGCTGATCAAATAAAGCCTGAGTCTCTGAGGAAGTATTTAGAGACAGCTGAGAAGTGCCTGGCCGAATGTGGGCTTGACCGCCCCACCATGGGTGAGGTGCTATTTAACTTGGAGCATGCCCTGCAACTTCAAGAAGAAGAACACTCGTCAGAGATCAACGAGAACGAAGAAGTCTCATTGCAAGTTGATGATACACAACCTTTACAAACCATTGCTTCGACTAGACAGTATAGCATGGAAAGTGCAGAAGACATTGTTGATACTTCAATGAGTAAGGTTTTTTCACAGATGGCAAATGGAAGTTCAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163538.p1 GENE.S_Transcript_163538~~S_Transcript_163538.p1 ORF type:5prime_partial len:395 (+),score=74.70,Pkinase_Tyr|PF07714.13|2.7e-47,Pkinase|PF00069.21|3.9e-46 S_Transcript_163538:2-1186(+)
GLIVGVAVGALSVVVILAVIVFLVLRRNRAYLEGKSTVNGEFGYRFSFAAIREATDNFSENLVVGVGGFGKVYKGVLKDGRKVAIKRGNTESQQGINEFRTEIEMLSHFRHRHLVSLIGYCDDQNEMILLYEYMENGTLKSHLYGSNNPVLSWKQRLEICIGAARGLHYLHTGSAKPIIHRDVKSANILLDENLMAEVADFGLSKAGPDLDKTHVTTAVKGSFGYLDPEYLIRQQLTEKSDVYSFGVVLFEVICGRPVIDPSLPREMINLVEWAMKVQRKGEFERIIDPNLADQIKPESLRKYLETAEKCLAECGLDRPTMGEVLFNLEHALQLQEEEHSSEINENEEVSLQVDDTQPLQTIASTRQYSMESAEDIVDTSMSKVFSQMANGSSR*

Click here to download the sequence:
Link to NCBI Protein BLAST