Transcript Information: S_Transcript_163603.p1


Annotated TAIR IDAT4G20780.1
Annotated Gene Namecalmodulin like 42
Annotated Gene Symbol(s)CML42
Annotation TypeOrtholog
Chromosome Positionchr4:11133309-11133884 | Reverse length=191
E-Value7.1E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.33930478231
Replicate 238.609881725651
Replicate 340.849042641308
Condition 2: 8 Hour
Replicate 151.4428275194
Replicate 250.336659439385
Replicate 358.525090354028
Condition 3: 24 Hour
Replicate 140.4321966361
Replicate 244.830609740933
Replicate 343.142970692962


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163603.p1 GENE.S_Transcript_163603~~S_Transcript_163603.p1 ORF type:5prime_partial len:228 (+),score=44.53,EF-hand_1|PF00036.28|4e-06,EF-hand_1|PF00036.28|6.3e+02,EF-hand_1|PF00036.28|1.6e+03,EF-hand_1|PF00036.28|8.5e-08,EF-hand_1|PF00036.28|5.4e-05,EF-hand_6|PF13405.2|2.7e-07,EF-hand_6|PF13405.2|1.6e+03,EF-hand_6|PF13405.2|5.6e+02,EF-hand_6|PF13405.2|5.1e-08,EF-hand_6|PF13405.2|0.12,EF-hand_7|PF13499.2|0.00015,EF-hand_7|PF13499.2|3.8e-11,EF-hand_5|PF13202.2|1.2e-05,EF-hand_5|PF13202.2|4.7e+03,EF-hand_5|PF13202.2|4.3e-07,EF-hand_5|PF13202.2|0.0088,EF-hand_8|PF13833.2|0.067,EF-hand_8|PF13833.2|2.1e+02,EF-hand_8|PF13833.2|0.0031,EF-hand_8|PF13833.2|0.00011,EF-hand_9|PF14658.2|3.1,EF-hand_9|PF14658.2|1.2e+04,EF-hand_9|PF14658.2|0.014 S_Transcript_163603:2-685(+)
CAATTCTTGAGTTACAGAAACCCCAGAGAAAAAAAAAAAAAAGCAACCCAGATGGAGAAAAAAAATGGGCTTACCCAAAGTCTCAGCATAAACAAGAAGGGATCCTCCTTCAAGCTCCGTTGCTCCAGTCTTAATTCCCTGCGTTTAAGGCGGGTATTTGACCTCTTTGACAAGAATGGCGATGGCATCATCACGGTTGATGAGATCAGTCAAGCTCTTTTGCTCCTCGGCCTCGATGCTGACTTCAACGAGCTCCGTTCCATCATCACCTCCTTCATTAATCCCGGCAACAAGGGTCTCACCTTCGACGATTTCCAATCCCTTCACAAGTCTCTCAATGACACTTTCTTTGACTGTCTTGAGCGTGATTTTGACCCTCCGCAACAACCCCACAATTCAGAAGCTCCTAATCTTGATGTTTTGAATGATGAAGATTTCAAGAAACAACAGGTGGAATCAGATCTGAGCGAGGCATTCCAGGTGTTCGACGAAAATGGTGATGGGTATATCTCTGCCAAGGAGCTCCAAGCTGTTCTTTCTAAGCTGGGTTTGCCTGAGGCTAATCAGGAGCTTCATCGGATTGAGCTTATGATCTCTTCCGTTGACCAGAACCATGATGGTCAAGTTGACTTCATTGAATTCAAGGAGATGATGTTGCGCTCTCTTCTTATTCCTTCTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163603.p1 GENE.S_Transcript_163603~~S_Transcript_163603.p1 ORF type:5prime_partial len:228 (+),score=44.53,EF-hand_1|PF00036.28|4e-06,EF-hand_1|PF00036.28|6.3e+02,EF-hand_1|PF00036.28|1.6e+03,EF-hand_1|PF00036.28|8.5e-08,EF-hand_1|PF00036.28|5.4e-05,EF-hand_6|PF13405.2|2.7e-07,EF-hand_6|PF13405.2|1.6e+03,EF-hand_6|PF13405.2|5.6e+02,EF-hand_6|PF13405.2|5.1e-08,EF-hand_6|PF13405.2|0.12,EF-hand_7|PF13499.2|0.00015,EF-hand_7|PF13499.2|3.8e-11,EF-hand_5|PF13202.2|1.2e-05,EF-hand_5|PF13202.2|4.7e+03,EF-hand_5|PF13202.2|4.3e-07,EF-hand_5|PF13202.2|0.0088,EF-hand_8|PF13833.2|0.067,EF-hand_8|PF13833.2|2.1e+02,EF-hand_8|PF13833.2|0.0031,EF-hand_8|PF13833.2|0.00011,EF-hand_9|PF14658.2|3.1,EF-hand_9|PF14658.2|1.2e+04,EF-hand_9|PF14658.2|0.014 S_Transcript_163603:2-685(+)
QFLSYRNPREKKKKATQMEKKNGLTQSLSINKKGSSFKLRCSSLNSLRLRRVFDLFDKNGDGIITVDEISQALLLLGLDADFNELRSIITSFINPGNKGLTFDDFQSLHKSLNDTFFDCLERDFDPPQQPHNSEAPNLDVLNDEDFKKQQVESDLSEAFQVFDENGDGYISAKELQAVLSKLGLPEANQELHRIELMISSVDQNHDGQVDFIEFKEMMLRSLLIPSS*

Click here to download the sequence:
Link to NCBI Protein BLAST