Transcript Information: S_Transcript_163735.p1


Annotated TAIR IDAT1G04880.1
Annotated Gene NameHMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1376106-1378264 | Reverse length=448
E-Value5.2E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62865357248458
Replicate 21.0423365145283
Replicate 31.7426207323087
Condition 2: 8 Hour
Replicate 10.50374937757007
Replicate 20.88078144250892
Replicate 30.16784131972426
Condition 3: 24 Hour
Replicate 10.51602086985656
Replicate 21.0707312555755
Replicate 32.5817840729646


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163735.p1 GENE.S_Transcript_163735~~S_Transcript_163735.p1 ORF type:3prime_partial len:127 (+),score=25.34,ARID|PF01388.17|8.8e-21 S_Transcript_163735:240-617(+)
ATGGCATCAGGAGGAAGTAGTTGCAATCAATACCCAGCACCTTTAGCAAAGTATGAGGAAGTGGCAGCCAATCGTCAACTTTTTATGACTACTCTTGAGAAGCTTCATAGTGCAATGGGCACCAAGTTCATGATTCCCATCATAGGAGGCAGAGACCTTGATCTCCACAAGCTCTTTCTGGAGGTGACTTCACGTGGTGGTATTGAGAAGATCCTCAGAGAAAAGAGATGGAAAGATGTTACAGCCACTTTCAACTTTCCTTCCACAGCCACAAATGCCTCATTCGTGTTGCGCAAGTACTATTATTCACTGCTCCAGCATTATGAGCGAATCTACTACTTCAAAGCCCAGGCTTGGAATCCTTCATCTACTGGTATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163735.p1 GENE.S_Transcript_163735~~S_Transcript_163735.p1 ORF type:3prime_partial len:127 (+),score=25.34,ARID|PF01388.17|8.8e-21 S_Transcript_163735:240-617(+)
MASGGSSCNQYPAPLAKYEEVAANRQLFMTTLEKLHSAMGTKFMIPIIGGRDLDLHKLFLEVTSRGGIEKILREKRWKDVTATFNFPSTATNASFVLRKYYYSLLQHYERIYYFKAQAWNPSSTGI

Click here to download the sequence:
Link to NCBI Protein BLAST