Transcript Information: S_Transcript_163807.p2


Annotated TAIR IDAT1G78910.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29665269-29667557 | Forward length=478
E-Value9E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35484001646907
Replicate 20.73542631858383
Replicate 30.49180629556268
Condition 2: 8 Hour
Replicate 11.4216926878089
Replicate 21.0440196031872
Replicate 31.4210565069988
Condition 3: 24 Hour
Replicate 10.29126511320792
Replicate 20.15109207717565
Replicate 30.16814696270077


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163807.p2 GENE.S_Transcript_163807~~S_Transcript_163807.p2 ORF type:complete len:150 (+),score=14.50 S_Transcript_163807:169-618(+)
ATGGGCATTGCCCTGCACCATAATCACAGGCACAACCGTTTACCCTGTCAGCTACTGCGTGCATTGAGACAATATTCCCGGATATCCCCTCCCCGAGCCGCCGAAACGGAGCCTGTGATCCGGGTTGTCAACAACATAGCTCACCTGGGCAGGCCCAAAGAGGGCCCAAAGCCGCGCCAGCTTCTCTCTCTTCCTCGTTTCCCTTCCCACCCTTTGCCTGCAAGATGTTTGACGAAATGCCCCAATGAGAAACCGTCTACCCGTGTCACTGCCATCAGTTGGGTCAAGTATTACTTTGATGAAGTTCATGATTCTGTTATTCAATCCCATTTCACTAAAGGCCTTATCCAAATGGAGTGTTTAAGTAAGAAAGATTCATCAAGCATCAAGGATCAAGAAAACAAGTCCATAGGGAAGCTAACCTACAGATTAAGCACAATGAAGTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163807.p2 GENE.S_Transcript_163807~~S_Transcript_163807.p2 ORF type:complete len:150 (+),score=14.50 S_Transcript_163807:169-618(+)
MGIALHHNHRHNRLPCQLLRALRQYSRISPPRAAETEPVIRVVNNIAHLGRPKEGPKPRQLLSLPRFPSHPLPARCLTKCPNEKPSTRVTAISWVKYYFDEVHDSVIQSHFTKGLIQMECLSKKDSSSIKDQENKSIGKLTYRLSTMKS*

Click here to download the sequence:
Link to NCBI Protein BLAST