Transcript Information: S_Transcript_163902.p1


Annotated TAIR IDAT4G28650.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14144155-14147276 | Reverse length=1013
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0586651714304
Replicate 21.6037784157722
Replicate 30.79713201147193
Condition 2: 8 Hour
Replicate 12.15767701637
Replicate 21.2746239892968
Replicate 32.7011241071145
Condition 3: 24 Hour
Replicate 10.98709689643156
Replicate 21.3580476484845
Replicate 32.2546228299269


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163902.p1 GENE.S_Transcript_163902~~S_Transcript_163902.p1 ORF type:complete len:1018 (+),score=191.35,Pkinase|PF00069.21|7.4e-47,Pkinase_Tyr|PF07714.13|6.3e-44,LRR_8|PF13855.2|0.084,LRR_8|PF13855.2|9.4e-08,LRR_8|PF13855.2|0.89,LRR_8|PF13855.2|0.00048,LRR_8|PF13855.2|0.0095,LRR_8|PF13855.2|0.0081,LRR_8|PF13855.2|0.00025,LRR_8|PF13855.2|0.004,LRR_8|PF13855.2|0.0005,LRR_8|PF13855.2|7.7e-07,LRR_8|PF13855.2|1.5e-09,LRR_4|PF12799.3|0.55,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|3,LRR_4|PF12799.3|9.4,LRR_4|PF12799.3|2.4,LRR_4|PF12799.3|0.22,LRR_4|PF12799.3|0.25,LRR_4|PF12799.3|0.3,LRR_4|PF12799.3|0.021,LRR_4|PF12799.3|0.19,LRR_4|PF12799.3|0.028,LRR_4|PF12799.3|0.71,LRR_4|PF12799.3|14,LRR_4|PF12799.3|2.4,LRR_4|PF12799.3|15,LRR_4|PF12799.3|0.019,LRR_4|PF12799.3|0.037,LRR_4|PF12799.3|0.019,LRR_1|PF00560.29|35,LRR_1|PF00560.29|48,LRR_1|PF00560.29|4.5e+02,LRR_1|PF00560.29|1.7e+02,LRR_1|PF00560.29|7e+02,LRR_1|PF00560.29|51,LRR_1|PF00560.29|6.7e+03,LRR_1|PF00560.29|4.6e+03,LRR_1|PF00560.29|56,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|44,LRR_1|PF00560.29|76,LRR_1|PF00560.29|2.8e+03,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|1.4,LRR_1|PF00560.29|17,LRR_1|PF00560.29|1.1,LRR_1|PF00560.29|8.6e+02,LRRNT_2|PF08263.8|6.4e-10,LRRNT_2|PF08263.8|7.7e+03 S_Transcript_163902:328-3381(+)
ATGCAGCTCAAAAATCAGTTGCTGTTATTGTTGTTCTTGTTTTACAGTTACATTGGTAGGTACACTATCAGTGGGGTTGCTGATGAAGTTTCAATTCTTTTGTCTATAAAAGAGAAATTCATTGATCCTTTGAACAAGCTTGATGACTGGAAGCTAAGCAATGGCTCAGCTCATTGCAGTTGGACAGGAGTTTCCTGCAATGCCTTGGGATGGATCGAGGAGCTCAATCTTTCCCACATGAATCTCAGTGGTAAAGTCTCTGATGAATTCCAACATCTGAGTTCTTTGAAGTCTTTGAACTTGTGCTGTAATGGGTTGTCATCATCTTTGCCAAGTTCCATCACCAATGTCACTTCTCTGAAGTTCATTGATGTGAGTCAGAATCAGTTTTCTGGGAGTTTTCCTGTGGGATTTGGGAGGTTTGATGGTTTGACATATCTAAATGCTTCTGGTAACAATTTTGAGGGTGAACTTCCTGGTGATGTGGGAAATGCTAGTTTGCTAGAGACTCTGGATTTCCGAGGAAGTTTCTTCGAGGGGTCAATTCCTGTCTCCTACATGAACTTGCAGAAGCTCAAGTTCTTGGGATTGTCAGGAAACAATCTGACTGGCCAGATTCCTGCTCAGCTAGGCCAGCTCTCGTCGTTGGAGACTATGATCCTTGGGTACAATTTTTACGAGAGTGGGATTCCGAAAGAGTTTGGAAAGCTTACTAATCTCAAGTGCTTGGATTTGGCACTTGGCAATCTTGGTGGTGAAATTCCTGCTGAATTGGGCGGCTTAAGCCAGCTCGACACTCTTTACTTGTACAAGAATAACTTGACAGGTGAAATCCCATCCACCATTGGTAACCTTTCTTCCTTGGTTCTGTTTGATGTATCGGATAATAAGTTGTCGGGGGAAATCCCAGCTGAGGTTGGTCAGTTGAAGAACTTGCAGCTGTTGAATCTGATGTGCAACCAGTTGAGTGGTTCGGTCCCTTCCGGGATTGGTCAGTTGTCTCAGTTGCAGGTTCTGGAGCTTTGGAACAACTCATTATCTGGTCCTTTGCCTAGTGATCTTGGCAGAAATGCGCCTTTGGAATGGCTGGATGTTTCGTCCAATTCATTCACAGGTGTAATCCCTGAAGGTGTCTGTGATGGAGGTAATCTAACTAAGCTCATTTTGTTCAATAATGCATTTAATGGTTCTATACCAACAAGTTTGTCTAGATGTCACTCGTTAGTACGAGTTCGTGCACAGAATAATCACATTTCTGGGACTATACCTTTGGGTCTAGGAAAATTGAGTAGCCTTCAGAGGTTAGAATTAGCAAACAATAGTCTGACTGGTACAATTCCGAATGATCTTGCTTCTTCGTCTTCCCTCTCGTTCATTGATCTTTCGAGAAACCTCCTGAGATCTTCTCTACCATCGACAATCCTTTCGATTCCAAACCTCCAGAATTTTCTGGCATCAAACAATCAATTAGATGGAGAAATCCCAGATCAGTTTCAGGATTGCCCTTCACTTTCTATTCTTGATCTGTCATCAAACCATTTCTCCGGTACTATCCCAGCTAGCATAGCTTCCTGTGAGAAATTGGTTACTTTGAATCTTAAGAACAATGAATTGACTGGTGAGATCCCCAAATCGATTGCAATGATGTCCACATTGGCAGTTCTTGATCTATCCAACAACTCCCTGACAGGGAAAATTCCTGATCAATTTGGTAGTTCACCAGCTTTAGAGATGTTCAATGTTTCACACAACCAGCTCTCTGGCCCTGTCCCTGCAAATGGCATACTTCAGACGATCAACCCAGCTGATCTAGCAGGAAATTCTGATCTCTGTGGTGGGGTACTCCCTCCTTGTTCTAGAGACTCGATGTATGGATCAGGCCACAGAAATCTCCATGCCAAACGCGTCCTAACAGGATGGGCAATCGGAGTTTCTGTTGTTCTGACAATCGGGATCCTGATCCTAGGGGGAAACATCATGTATAAGAGATGGTACTCTAACGGGACATGCTTTGAGAGATATGACACAGGTGGTGGGGAGTGGCCATGGAGGCTAATGGCTTTCCAGAGGCTCGGTTTCACCAGACATGACATCCTGTCGTGTATCAAGGAGTCCAATGTGATTGGTATGGGAGCAACCGGGATAGTCTACAAGGCCGAAATGTCTAGGCTAAACATGGTTGTGGCAGTCAAGAAGCTGTGGAAATCAAACTCTGATATCGAGACAGGAAGTGGAAGTGGTGATCTTGTAGGGGAGGTGAACCTGCTAGGCAAGTTAAGGCATAGGAATATTGTGCGATTGTTGGGATTTCTCCACAATGACAAGGAAGCTATGATCATTTATGAGTATATGCATCACGGTAATCTTGGAGAAGCTTTACATGGAAAACAAGCCGGGAGGTTGTTAGTAGATTGGGTATCAAGATATAACATCGCGGTTGGTGTTGCTCAAGGCCTCACTTACCTTCATCATGATTGCCACCCCCCAGTTATTCACCGAGATGTCAAATCAAACAACATATTGCTGGATGCCAAGTTAGAAGCAAGGATCGCGGACTTTGGATTGGCTAAGATGATGCTGAGGAAGAATGAGACCGTCTCTATGGTTGCTGGATCTTATGGTTACATAGCCCCTGAGTATGGGTACACACTGAAGGTTGATGAGAAGAGCGATATCTACAGCTTTGGAGTGGTTCTCTTGGAGCTGCTAACAGGAAAAAGACCACTAGACCGTGAATTTGGAGAATCGACAGATGTCGTAGAATGGATCAGAAGCAAAGCAAGGAACAACAAACAATTAGAAGAAGTGCTCGACCCCAGCTTAGCAGGGAACACTACACATGTCCAAGAGGAGATGCTGTTGGTACTTAGAATCGCGATGCTTTGCACAGCCAAGCAACCAAAGGACCGACCCTCAATGAGAGATGTCATAACAATGCTCGGAGAAGCAAAGCCTAGGAGGAAAAGCAGTAGCAATAGCAACAGTATAGCCACGATTAACAAAGACAAGGACAAACCAGTTTTTAGCCCCTCACCTGTAAATGGTCTTCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163902.p1 GENE.S_Transcript_163902~~S_Transcript_163902.p1 ORF type:complete len:1018 (+),score=191.35,Pkinase|PF00069.21|7.4e-47,Pkinase_Tyr|PF07714.13|6.3e-44,LRR_8|PF13855.2|0.084,LRR_8|PF13855.2|9.4e-08,LRR_8|PF13855.2|0.89,LRR_8|PF13855.2|0.00048,LRR_8|PF13855.2|0.0095,LRR_8|PF13855.2|0.0081,LRR_8|PF13855.2|0.00025,LRR_8|PF13855.2|0.004,LRR_8|PF13855.2|0.0005,LRR_8|PF13855.2|7.7e-07,LRR_8|PF13855.2|1.5e-09,LRR_4|PF12799.3|0.55,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|3,LRR_4|PF12799.3|9.4,LRR_4|PF12799.3|2.4,LRR_4|PF12799.3|0.22,LRR_4|PF12799.3|0.25,LRR_4|PF12799.3|0.3,LRR_4|PF12799.3|0.021,LRR_4|PF12799.3|0.19,LRR_4|PF12799.3|0.028,LRR_4|PF12799.3|0.71,LRR_4|PF12799.3|14,LRR_4|PF12799.3|2.4,LRR_4|PF12799.3|15,LRR_4|PF12799.3|0.019,LRR_4|PF12799.3|0.037,LRR_4|PF12799.3|0.019,LRR_1|PF00560.29|35,LRR_1|PF00560.29|48,LRR_1|PF00560.29|4.5e+02,LRR_1|PF00560.29|1.7e+02,LRR_1|PF00560.29|7e+02,LRR_1|PF00560.29|51,LRR_1|PF00560.29|6.7e+03,LRR_1|PF00560.29|4.6e+03,LRR_1|PF00560.29|56,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|44,LRR_1|PF00560.29|76,LRR_1|PF00560.29|2.8e+03,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|1.4,LRR_1|PF00560.29|17,LRR_1|PF00560.29|1.1,LRR_1|PF00560.29|8.6e+02,LRRNT_2|PF08263.8|6.4e-10,LRRNT_2|PF08263.8|7.7e+03 S_Transcript_163902:328-3381(+)
MQLKNQLLLLLFLFYSYIGRYTISGVADEVSILLSIKEKFIDPLNKLDDWKLSNGSAHCSWTGVSCNALGWIEELNLSHMNLSGKVSDEFQHLSSLKSLNLCCNGLSSSLPSSITNVTSLKFIDVSQNQFSGSFPVGFGRFDGLTYLNASGNNFEGELPGDVGNASLLETLDFRGSFFEGSIPVSYMNLQKLKFLGLSGNNLTGQIPAQLGQLSSLETMILGYNFYESGIPKEFGKLTNLKCLDLALGNLGGEIPAELGGLSQLDTLYLYKNNLTGEIPSTIGNLSSLVLFDVSDNKLSGEIPAEVGQLKNLQLLNLMCNQLSGSVPSGIGQLSQLQVLELWNNSLSGPLPSDLGRNAPLEWLDVSSNSFTGVIPEGVCDGGNLTKLILFNNAFNGSIPTSLSRCHSLVRVRAQNNHISGTIPLGLGKLSSLQRLELANNSLTGTIPNDLASSSSLSFIDLSRNLLRSSLPSTILSIPNLQNFLASNNQLDGEIPDQFQDCPSLSILDLSSNHFSGTIPASIASCEKLVTLNLKNNELTGEIPKSIAMMSTLAVLDLSNNSLTGKIPDQFGSSPALEMFNVSHNQLSGPVPANGILQTINPADLAGNSDLCGGVLPPCSRDSMYGSGHRNLHAKRVLTGWAIGVSVVLTIGILILGGNIMYKRWYSNGTCFERYDTGGGEWPWRLMAFQRLGFTRHDILSCIKESNVIGMGATGIVYKAEMSRLNMVVAVKKLWKSNSDIETGSGSGDLVGEVNLLGKLRHRNIVRLLGFLHNDKEAMIIYEYMHHGNLGEALHGKQAGRLLVDWVSRYNIAVGVAQGLTYLHHDCHPPVIHRDVKSNNILLDAKLEARIADFGLAKMMLRKNETVSMVAGSYGYIAPEYGYTLKVDEKSDIYSFGVVLLELLTGKRPLDREFGESTDVVEWIRSKARNNKQLEEVLDPSLAGNTTHVQEEMLLVLRIAMLCTAKQPKDRPSMRDVITMLGEAKPRRKSSSNSNSIATINKDKDKPVFSPSPVNGLL*

Click here to download the sequence:
Link to NCBI Protein BLAST