Transcript Information: S_Transcript_163904.p1


Annotated TAIR IDAT4G17380.1
Annotated Gene NameMUTS-like protein 4
Annotated Gene Symbol(s)MSH4, ATMSH4
Annotation TypeOrtholog
Chromosome Positionchr4:9708742-9714068 | Forward length=792
E-Value2.5E-246
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0031508226121
Replicate 20.63595624001706
Replicate 30.69518073929315
Condition 2: 8 Hour
Replicate 11.2766863382763
Replicate 21.1905196615376
Replicate 31.2761150450876
Condition 3: 24 Hour
Replicate 11.0171675239523
Replicate 21.0050470765564
Replicate 30.72702123562419


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163904.p1 GENE.S_Transcript_163904~~S_Transcript_163904.p1 ORF type:complete len:451 (+),score=77.98,MutS_III|PF05192.14|2.7e-20,MutS_IV|PF05190.14|5.3e-13 S_Transcript_163904:594-1946(+)
ATGATCTTTTTGGCTCAGGGAGCTGTCTTGATTAAGAACTTGGCAGCAAAGGAGCCCTCTGCCCTTGGTCTTGATAGTTACTACAAGCAATACTATCTTTGTCTGGCAGCAGCAGCTGCTATTATCAAATGGACAGAAGCAGAAAAAGGGGTTATTATAACAAACCATGCTTTAGTGGTTACTTTTAATGGATCTTTTGACCATATGAATATTGATGCTACCAGTGTACAAAACTTGGAACTCATTGAGCCTTTGCACTCAAATCTTTTGGGTACAAGCAACAAGAAAAAAAGTCTCTTCCATATGCTTAAGACAACAAGAACTACAGGAGGCACTAGACTTCTCCGTGCCAATCTTCTGCAACCTTTGAAAGACATTGAGACTATAAATGCTCGTCTTGATTGCCTGGATGAACTGATGAGGAATGAGCAACTCTTTTTTGGACTTTCTCAGGTTCTGCGGAAGTTTCCAAAAGAAACTGATAGAGTACTGTGTCACTTTTGCTTCAAGCAGAAGAATGTCACAAACAAGGTTTTGGCCAACGACAGTGCTAAAAAGAGCCAAATAATGATATCAAGCATTATTCTTCTCAAAACTGCTTTAGAGGCCTTGCCTATGCTTTCAATGGTGCTCAAAGATGCAAAATGTTTTCTTCTTGGAAACATTTATAAGTCTATATATGAGAATGAAACATATGCCCTCATCAGACAAAGAATTTGTGAAGTGATAGATGAGGATGTCGTTTATGCAAGAGTTCCTTTCATTGCTCGTACACAACAATGTTTTGCTGTCAAGGCTGGAATAGATGGACTGCTAGATGTCGCACGAAGGACATTTTGTGATACTAGTGAAGCTATACATAAGCTCGCAACCAAGTATCGTGAAGATTTTAAACTGCCAAATTTGAAACTTCCTTTCAACAATAGACAAGGATTTTATTTGAGCATCCCTCAGAAAGAGTTCCAAGGAAAACTTCCGAGCAAGTTCATCCAGGTAGTGAAACATGGGAACAATCTACACTGCTCTTCCTTAGAACTAGCATCGCTGAATGCAAGGAACAAGTCCGCAGCTGCAGAATGTTGCATCAGAACAGAACTTTGCTTGGAAGCTCTAAATGATGCCATAAGGGAAGATGTATCTGTGCTCACACTGCTTGCAGAGATGTTATGCCTTCTAGATATGGTTGTCAATTCATTTGCTCACATGATATCAACCAAGCCAGTTGATCGCTATATTAGGCCAGAATTCACAGGTACTGTAACATGGTTTGGGATCACAAATTCTACAACAACAACTAAGCCTAAGTCCCAAACAGATTTGTGGTCAACTAACATGGAAAGTCACAAATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163904.p1 GENE.S_Transcript_163904~~S_Transcript_163904.p1 ORF type:complete len:451 (+),score=77.98,MutS_III|PF05192.14|2.7e-20,MutS_IV|PF05190.14|5.3e-13 S_Transcript_163904:594-1946(+)
MIFLAQGAVLIKNLAAKEPSALGLDSYYKQYYLCLAAAAAIIKWTEAEKGVIITNHALVVTFNGSFDHMNIDATSVQNLELIEPLHSNLLGTSNKKKSLFHMLKTTRTTGGTRLLRANLLQPLKDIETINARLDCLDELMRNEQLFFGLSQVLRKFPKETDRVLCHFCFKQKNVTNKVLANDSAKKSQIMISSIILLKTALEALPMLSMVLKDAKCFLLGNIYKSIYENETYALIRQRICEVIDEDVVYARVPFIARTQQCFAVKAGIDGLLDVARRTFCDTSEAIHKLATKYREDFKLPNLKLPFNNRQGFYLSIPQKEFQGKLPSKFIQVVKHGNNLHCSSLELASLNARNKSAAAECCIRTELCLEALNDAIREDVSVLTLLAEMLCLLDMVVNSFAHMISTKPVDRYIRPEFTGTVTWFGITNSTTTTKPKSQTDLWSTNMESHKF*

Click here to download the sequence:
Link to NCBI Protein BLAST