Transcript Information: S_Transcript_163921.p1


Annotated TAIR IDAT1G12790.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4359597-4361222 | Reverse length=250
E-Value3E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.75319814816549
Replicate 20
Replicate 31.9138688388642
Condition 2: 8 Hour
Replicate 11.8106463476811
Replicate 21.0552758792324
Replicate 30.80437160773515
Condition 3: 24 Hour
Replicate 10.61825141954512
Replicate 21.0690477158654
Replicate 30.2379438151426


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163921.p1 GENE.S_Transcript_163921~~S_Transcript_163921.p1 ORF type:complete len:106 (+),score=15.45 S_Transcript_163921:126-443(+)
ATGGGGGATATGAGAGCTCAAGCCCCTTCTATGCCGTTGGACTCTACCCTAAACACAGTTAATGGTCATGGTGGAGTTTGTATGATGAGTAACAAGTGGAAAGAGGAGCAGCACCCATCCTTCATCAACTTCATCTCCACGTTCCTCACCGCTAACTCTTTCCGTCTAAATATAGTCCCTGTTGCGCCTGATTTCATTTTCAACTGTGGAGGTGTATCAGTTGCATTCATATTTGTGACCAGCTGGAATTCCACCACTACTGCTCCCCTCTTGTATAGCAGGGTACTCAAGCTAAAGGAGCAGTTTGCACACCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163921.p1 GENE.S_Transcript_163921~~S_Transcript_163921.p1 ORF type:complete len:106 (+),score=15.45 S_Transcript_163921:126-443(+)
MGDMRAQAPSMPLDSTLNTVNGHGGVCMMSNKWKEEQHPSFINFISTFLTANSFRLNIVPVAPDFIFNCGGVSVAFIFVTSWNSTTTAPLLYSRVLKLKEQFAHL*

Click here to download the sequence:
Link to NCBI Protein BLAST