Transcript Information: S_Transcript_163932.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37351580680955
Replicate 20.46447978015821
Replicate 30.9059589655102
Condition 2: 8 Hour
Replicate 11.7209964115581
Replicate 21.2559634324057
Replicate 31.9446036411562
Condition 3: 24 Hour
Replicate 10.76648714002085
Replicate 21.033787896465
Replicate 30.8849840142146


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163932.p1 GENE.S_Transcript_163932~~S_Transcript_163932.p1 ORF type:5prime_partial len:285 (+),score=49.39,RVT_1|PF00078.23|5.5e-31 S_Transcript_163932:2-856(+)
TCTGATGAGAATTCTAAATATTTCCATGCTAGGATTGTAGGGAGGAAAGCTCAAGGAAGGATAGGTAATATTTATGATCATCAGGGCAAAGAAAGGAAGGGCCAAGATGATGTTGCTGGTGCATTTGTTGAGTATTATCAGAGTCTGTTTGGAGTGGAGAAGGCCTATGGAGTCATTGATCGTATCAAGTTTGCTGATGGTCCTATTTTGACCAGTTCTATGCAAGGGGAGTTAGTTCTTCCCATCACTAATATGGAGATCAAGGAGGCCCTTTTTGCATGCATAAAGATAAGAGTCCAGGCCCTGATGAGTTTGATCCTGGTTTTTTCAAGAAGGCTTGGGGTATTATTGGCAAGGATATTTGTGAGGCCATCAAAGAATTCTTTAATTCAGGTGATCACCCAAGTAATGGCTAACAGGCTACAGAAGGTTATGGCTCATCTTGTGGGTAAAAAACAGTCTGCATTTGTTACTGGGAGATTGTTGTTTGAGAATGTATTGCTGGCTCATGAGCTCACCCAACATTATAACATGGCCCACATTTCCCCTAGGACCATTATGAAGGTTGATATCCAGAAGGCATATGACACTGTCAATTGGAATTTTATTAAAGTTGTTTTAGCTACTTTTGGCATTCCAGATAGTTTCATACATTGGATTATGGCCTGCATTACATCTTCCCGTTTCTCTATAAGTATTAAAGGGTGGTATAAGGGGTACTTTGAAGGAAAATGTGGTTTAAGGCAGGGTGATCCTATTTCACCATACTTATTTGTTCTTTGCATGGAAGCACTTTCAAGAATGCTCAGGACTTTAAAGAAGGATAGGGCTTTTCTTTACATCCTAATGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163932.p1 GENE.S_Transcript_163932~~S_Transcript_163932.p1 ORF type:5prime_partial len:285 (+),score=49.39,RVT_1|PF00078.23|5.5e-31 S_Transcript_163932:2-856(+)
SDENSKYFHARIVGRKAQGRIGNIYDHQGKERKGQDDVAGAFVEYYQSLFGVEKAYGVIDRIKFADGPILTSSMQGELVLPITNMEIKEALFACIKIRVQALMSLILVFSRRLGVLLARIFVRPSKNSLIQVITQVMANRLQKVMAHLVGKKQSAFVTGRLLFENVLLAHELTQHYNMAHISPRTIMKVDIQKAYDTVNWNFIKVVLATFGIPDSFIHWIMACITSSRFSISIKGWYKGYFEGKCGLRQGDPISPYLFVLCMEALSRMLRTLKKDRAFLYILMC*

Click here to download the sequence:
Link to NCBI Protein BLAST