Transcript Information: S_Transcript_163934.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62252634468258
Replicate 20
Replicate 30.10785225779883
Condition 2: 8 Hour
Replicate 10.62354942447757
Replicate 20.26165904841785
Replicate 30.62327039780647
Condition 3: 24 Hour
Replicate 10.12774785667014
Replicate 20.3976107294096
Replicate 30.8849840142146


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163934.p1 GENE.S_Transcript_163934~~S_Transcript_163934.p1 ORF type:complete len:171 (-),score=15.02,RVT_1|PF00078.23|8.8e-16 S_Transcript_163934:591-1103(-)
ATGGCCTGCATTACTTCTTCTCGGTTCTCTATTAGCATTAATGGGTGGTATAAGGGGTATTTTGAAGGAAAGTGTGGATTAAGGCAGGGAGATCCCATTTCTCCCTATCCTTTTGTTCTCTGTATAGAAGGCTTATCTCGAATGTTGAGGAATATGGGTACCATGTACGGGTTTTCTTTCCATCCTAAAACTGTCAGAGTAAGAATGAATCACATCATTTTTGCTGATGATCTTCTGGTCTTCACTAGAGGGGATGTCCCTGTAGTACAGAAGGTTTTCAACTGTCTTAATACTTTTTCAACTATGTCTGGTGTACAAATTAATAGAGCAGAGACAGAGGTGTATATGGGTGGTATCATTGTAGATATTCAAAAAGAAATACTGGATTTGACAAGTTTTGTGAAGGGAGTATTGCCAGTAAGATACTTGGGCTTACCCTTAAGCTTAGCAGGCATTTCACATGCCATGTGCACAAGTCTGATTGATAAAATCAAAAGGAAATTAAATCACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163934.p1 GENE.S_Transcript_163934~~S_Transcript_163934.p1 ORF type:complete len:171 (-),score=15.02,RVT_1|PF00078.23|8.8e-16 S_Transcript_163934:591-1103(-)
MACITSSRFSISINGWYKGYFEGKCGLRQGDPISPYPFVLCIEGLSRMLRNMGTMYGFSFHPKTVRVRMNHIIFADDLLVFTRGDVPVVQKVFNCLNTFSTMSGVQINRAETEVYMGGIIVDIQKEILDLTSFVKGVLPVRYLGLPLSLAGISHAMCTSLIDKIKRKLNH*

Click here to download the sequence:
Link to NCBI Protein BLAST