Transcript Information: S_Transcript_163941.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57603898777447
Replicate 20.66856938053075
Replicate 30.8782255277905
Condition 2: 8 Hour
Replicate 11.7540364330109
Replicate 22.324347910621
Replicate 31.3841459483754
Condition 3: 24 Hour
Replicate 10.94566595197377
Replicate 20.68678216898022
Replicate 31.201049733577


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163941.p1 GENE.S_Transcript_163941~~S_Transcript_163941.p1 ORF type:complete len:231 (+),score=26.82,RVT_1|PF00078.23|8.1e-29 S_Transcript_163941:2339-3031(+)
ATGCAGTTAGATATTCAGAAAGAATATGACACAATCAGTTGGAACTTCATAAAGGTTGTGATCATCACCTTTGGATTTCCTACTCAATTTTGTGACAAAGTAATGGCCTGTATCACATCTTCGAGGTTCTCTATAAGCATAAATGGCTGGCAAAAAGAATACTTTGAAGGTAAAGGTGGGCTGAGGCAAGGGGATCCATTATCCCCCTACCTTTTTGTCCTTAGCATGGAAGCTCTTTCAAGAATGCTCAGACGGCTCAAAAGGGCACAGGGGTATTCCTTCCACCGAAAGTGCAGAAGAATGGAACTCAACCACCTTGCCTTTGCAGATGATTTACTAACTTTTACAAGGGGTGACCATCCATCTGTAGAAGCAGCCATACACTGTGTCACCAGATTCTCCCTCATGTCTGGCCTAAAAATAAACCCTAACAAGACTTGTATTTTCTTTGGAGGGCTAAAGCAAGAAGTAAAGGATCTGATTTTGAGGTCTATTGGGTTCATTGAAGGTAAATTACATGTGAGATATCTAGGACTTCCCCTAAGCTCCTCAGGTATCAAAGCAGATATGTGCAAAAGTCTGATAGAGAAAATGCAGCATAAATTCAATCACTGGGCAAGTCAGACACTCTCCTATGCAGGTAAGATTGAGTTGTTAACTCAGTACTATTTGGGATGGAAACTTTTGGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163941.p1 GENE.S_Transcript_163941~~S_Transcript_163941.p1 ORF type:complete len:231 (+),score=26.82,RVT_1|PF00078.23|8.1e-29 S_Transcript_163941:2339-3031(+)
MQLDIQKEYDTISWNFIKVVIITFGFPTQFCDKVMACITSSRFSISINGWQKEYFEGKGGLRQGDPLSPYLFVLSMEALSRMLRRLKRAQGYSFHRKCRRMELNHLAFADDLLTFTRGDHPSVEAAIHCVTRFSLMSGLKINPNKTCIFFGGLKQEVKDLILRSIGFIEGKLHVRYLGLPLSSSGIKADMCKSLIEKMQHKFNHWASQTLSYAGKIELLTQYYLGWKLLV*

Click here to download the sequence:
Link to NCBI Protein BLAST