Transcript Information: S_Transcript_163955.p1


Annotated TAIR IDAT4G35800.1
Annotated Gene NameRNA polymerase II large subunit
Annotated Gene Symbol(s)NRPB1, RPB1, RNA_POL_II_LSRNA_POL_II_LS, RNA_POL_I
Annotation TypeOrtholog
Chromosome Positionchr4:16961115-16967892 | Reverse length=1839
E-Value6.9E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5502719166124
Replicate 21.2852110421853
Replicate 31.9696125914525
Condition 2: 8 Hour
Replicate 14.7619803620782
Replicate 22.1720241397793
Replicate 35.794599348927
Condition 3: 24 Hour
Replicate 11.696689979852
Replicate 20.88014802238242
Replicate 31.4692453051524


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163955.p1 GENE.S_Transcript_163955~~S_Transcript_163955.p1 ORF type:complete len:103 (+),score=8.42,RNA_pol_Rpb1_3|PF04983.14|5.7e-12 S_Transcript_163955:273-581(+)
ATGGAACCAGGAATCAGAAATAGGGTTTCTGGGTCCTACAGATACGTAACTCGAGTGCTAATTGAGAAAAGAAGGTTATTATCTGGCACGCTTTGCAGGAAGACTCGTGGGACATCGAGTGGAAGTCTTATTCATTGTGTTTGGGAAGCAGTTGGGCCGGATGCAGCTTGCAAATTTCTAGGGCATACCCAGTGGCTTGTTAACTGGCTTTTACAGAATGGTTTTAGCGTGGTCATTGGAGATAGAATTGCCAATGCTGGTACAATGGACATCATTATGAGATCATATCTAAGGCCAAAAATGTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163955.p1 GENE.S_Transcript_163955~~S_Transcript_163955.p1 ORF type:complete len:103 (+),score=8.42,RNA_pol_Rpb1_3|PF04983.14|5.7e-12 S_Transcript_163955:273-581(+)
MEPGIRNRVSGSYRYVTRVLIEKRRLLSGTLCRKTRGTSSGSLIHCVWEAVGPDAACKFLGHTQWLVNWLLQNGFSVVIGDRIANAGTMDIIMRSYLRPKMC*

Click here to download the sequence:
Link to NCBI Protein BLAST