Transcript Information: S_Transcript_164108.p1


Annotated TAIR IDAT4G13620.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7932138-7933304 | Forward length=388
E-Value9.1E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4237739050188
Replicate 20.28105464404477
Replicate 30.17620448487516
Condition 2: 8 Hour
Replicate 12.2412034409726
Replicate 22.9211649497732
Replicate 32.2402005444726
Condition 3: 24 Hour
Replicate 10.48698784851643
Replicate 20.072177743873718
Replicate 30.32129992872759


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_164108.p1 GENE.S_Transcript_164108~~S_Transcript_164108.p1 ORF type:5prime_partial len:314 (+),score=46.90,AP2|PF00847.16|4.6e-12 S_Transcript_164108:1-942(+)
AAAAAACCGTCAGGCATGGAAATCATAGAATCTATTGACATTAGAGATTCACTATCAGCACTCATTTTAACAGCAGGTGCTACCAACACCAACACCTTGGATTCAATCTTCTCATACGGCCCACCTAATTTAAACCCCACCACCACTACAACTCTTGATCAGCCATTAGGGTCCTCAATCTACTTGAAACAAAGAGATATACTCCAACAATTCTGGCTCGAGAGCCAGCCCAAAACTATGATCCCTAGCTCCGAATTTCAAATGCCTTGCTTTGCTCTCAAGCCTGTGAAAAAGAAGTTATATAGGGGAGTGAGGCAAAGGCACTGGGGCAAATGGGTGGCTGAAATAAGACTACCTCAGAACAGAATGAGGGTCTGGTTGGGTACCTACGAAACAGCAGAAGCTGCTGCCTATGCGTATGATCGCGCAGCCTATAAGCTTAGAGGGGAGTATGCTCGCTTGAACTTCCCCAATCTCGACGATCCTACTGCTCTAGGTGTTGGAAATTCTGCACGGATAAATGCCCTTAAGGCGGCTGTTGATTCCAAAATCCAAGCGATTTGCCAGAAATTGAAGCGCCAAAGAGCCAACAAAATTGCCAACAACAAGAAGAAACAGCAGGAACAACAACAGCAGAAACAGTCAGTACTTGACAACACCTGTGTTACAAAGAGTGGCAATCAGAGTCATAGTAGTACTACTGAAAATACTACTACTTTGATGAAGGATTCATATTCCTCATCATCTAATTCATCATTGTGTTGCTCTTCCGGAATGATTAATGACAGTACTAGTGGGATCAACAACGAAATGGTGTCTCCAGCTGTTTCTGATTCCACCAGTTATTCTGTGGTAGAACAGGATTTTGGGTTTCTAGACTGTTCCTTAGCAAGAATGCCATCTTTTGATCCAGAGTTGATCTGGGAAGTCCTTGCTAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_164108.p1 GENE.S_Transcript_164108~~S_Transcript_164108.p1 ORF type:5prime_partial len:314 (+),score=46.90,AP2|PF00847.16|4.6e-12 S_Transcript_164108:1-942(+)
KKPSGMEIIESIDIRDSLSALILTAGATNTNTLDSIFSYGPPNLNPTTTTTLDQPLGSSIYLKQRDILQQFWLESQPKTMIPSSEFQMPCFALKPVKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLDDPTALGVGNSARINALKAAVDSKIQAICQKLKRQRANKIANNKKKQQEQQQQKQSVLDNTCVTKSGNQSHSSTTENTTTLMKDSYSSSSNSSLCCSSGMINDSTSGINNEMVSPAVSDSTSYSVVEQDFGFLDCSLARMPSFDPELIWEVLAN*

Click here to download the sequence:
Link to NCBI Protein BLAST