Transcript Information: S_Transcript_164476.p1


Annotated TAIR IDAT3G21320.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT2G25930.1); Has 63 Blast hits to 58 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7499408-7501312 | Reverse length=540
E-Value3.7E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61890700546931
Replicate 20.25654406462226
Replicate 30.857801678307
Condition 2: 8 Hour
Replicate 10.49593930970077
Replicate 21.5608266492833
Replicate 31.2392934654059
Condition 3: 24 Hour
Replicate 12.0320821851716
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_164476.p1 GENE.S_Transcript_164476~~S_Transcript_164476.p1 ORF type:internal len:86 (+),score=9.53 S_Transcript_164476:1-255(+)
GGGATAATAGGAAGAAAACATTTCTGGAAAGCTAGAACTGCTATTGTCAATCAACAAAGAGTGTTTGCTGTTCAAGTATTCGAGTTGCACAGACTGATAAAGGTACTTAGCTCTCTTCTGACACCAACACGTCTGGACTCTATCATTGGAACTCAAACCTTGAAATTGCTGCAGTTACAAAAACATATTGCGGGATCTCCACATTTGCTACTTGAAGGTAGCGCTTTTGTGGGTAAGACATCTTTAAAGGATTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_164476.p1 GENE.S_Transcript_164476~~S_Transcript_164476.p1 ORF type:internal len:86 (+),score=9.53 S_Transcript_164476:1-255(+)
GIIGRKHFWKARTAIVNQQRVFAVQVFELHRLIKVLSSLLTPTRLDSIIGTQTLKLLQLQKHIAGSPHLLLEGSAFVGKTSLKDS

Click here to download the sequence:
Link to NCBI Protein BLAST