Transcript Information: S_Transcript_164561.p1


Annotated TAIR IDAT2G32590.1
Annotated Gene NameLOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13829420-13833209 | Reverse length=671
E-Value5E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14703315599547
Replicate 21.0970447846278
Replicate 30.71325498665858
Condition 2: 8 Hour
Replicate 11.7672975400939
Replicate 20.61800686850074
Replicate 31.1776711383968
Condition 3: 24 Hour
Replicate 10.24137992807286
Replicate 21.0017154287888
Replicate 30.5573932465219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_164561.p1 GENE.S_Transcript_164561~~S_Transcript_164561.p1 ORF type:3prime_partial len:181 (+),score=38.97,Cnd2|PF05786.10|4.4e-09,Cnd2|PF05786.10|2.8 S_Transcript_164561:683-1222(+)
ATGGCTAGCAATGTATACTATGTTGAATTCTTCTGTTTTTTTGATAGACAACTAATTAGTTTTTGTCAAAGGAACTGTGTAGGCCCAGACAACATCTTTGCTTCTGACGATGGGTTGGATTCTGCTGCGAAGAGGCCATGTAATAAAAAATCAAAAGAATTGGATATTGAATTCACAAGTTATTTGCATGAAGGATTGCCAGACATTTTTGCTCCTGCCAAGAATCCCAAATCTTTGCTGCTTCCTCCAAGAAAGATCCCATCTTCAAACACACTTCCAGAAGATTGTCATTATCAACCAGAGGATCTTGTCAGATTGTTTCTTCGTCCAGATATTATGTGCCTTGGGAAGAGAAGTCATCGTAGAGTGTCAGATAGTGATTTTGGGCACTGGCAAAATCATTGTGATGGATCACATTTGAACAAAGAAACTTCAGCTAGTGGCCTATTTGAGGATGAGTGTATTCACGGCGACTTAGAAGAGGATGAACTTGTGTCACAACCTCGTCAGGTTGATAAAGTTGAAGTTCAATATGATAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_164561.p1 GENE.S_Transcript_164561~~S_Transcript_164561.p1 ORF type:3prime_partial len:181 (+),score=38.97,Cnd2|PF05786.10|4.4e-09,Cnd2|PF05786.10|2.8 S_Transcript_164561:683-1222(+)
MASNVYYVEFFCFFDRQLISFCQRNCVGPDNIFASDDGLDSAAKRPCNKKSKELDIEFTSYLHEGLPDIFAPAKNPKSLLLPPRKIPSSNTLPEDCHYQPEDLVRLFLRPDIMCLGKRSHRRVSDSDFGHWQNHCDGSHLNKETSASGLFEDECIHGDLEEDELVSQPRQVDKVEVQYDK

Click here to download the sequence:
Link to NCBI Protein BLAST