Transcript Information: S_Transcript_164562.p1


Annotated TAIR IDAT2G32590.1
Annotated Gene NameLOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13829420-13833209 | Reverse length=671
E-Value1E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0804952105678
Replicate 21.6169796906973
Replicate 32.1326290911004
Condition 2: 8 Hour
Replicate 11.7018633966442
Replicate 23.6071873213891
Replicate 32.3954291282471
Condition 3: 24 Hour
Replicate 12.9173948635647
Replicate 21.1811758476272
Replicate 31.4788169358048


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_164562.p1 GENE.S_Transcript_164562~~S_Transcript_164562.p1 ORF type:3prime_partial len:614 (+),score=131.40,Cnd2|PF05786.10|8.6e-80,Cnd2|PF05786.10|1.8e-09 S_Transcript_164562:178-2016(+)
ATGACAGCGCGTGTAGTTCAGTCACCAAAGAGCCCGTTCTTCCTAGGCTCCAACGACGATCAAATGGAACGCGCCGCCGCACGTGCTGCACACGCCGCCGCAGTCCGTCGTAATCCCGTCGAAATCGCTCCTGCTCAACAACAACCACCTCCTCGTCCTTCTCTGTCCTCGAACTCCTTTCTTACTCGCGACCAGATCATCGAGCTCTTCCGTAACTGCTACAAGCTCGCCTCTGAGAATAGGATAAACCAGAAGAATACGTGGGAGTTGAAGCTGATTGATCATATAAGTGAGATCATCAAAGTTGATGCTGAAGATCATAACCACGAGACCAACTTTCAAAAGGCTAGTTGTACGTTGGAAGCTGGAGTGAAGATTTATGCCGCGAGGGTGGATGCCTGGCATGCTGATGCGTACAGAGTCCTTAGTACAATCAGTGGAGCTGGTTTTCAAGATGATCAAGGAAGTTCAGTTGAAGGAGACAAGACCAGTAATGAGAGAGATGTGATTAGGCCGAAAAAGGAAACGGATAGAAAGGTTTCACCTTTGTCGACAGTGGAGTCATCTTTTGAAGCTTTGAATGTGAAGAAGTTTGATGTGGCCTTTGTAGTGGATCCTCTTTATAGTCAGTCATCTGCACAATTTGACGAAGGTGGGGCAAATGGTCTTCTTCTGTATAACCTTGGAGTGTATGGAAGGTGCTGGGTACTTTTTGATTCCAAAGAAGTTCCAGCAAAGTGCACACGATCTACAAATGTTTGTACTAGTTCAGATCTTGTTGATATCTTCTTTGCTAAAGAATGCATCGATCAGTTGGTGATAAACATGCGTACTGAGCAACATATATCTCCCACTCTCGGAGATATAACAAAGTCCCTCGAAGAGCAATACTTTTTGCCAAGGATATTTGATGGACCAGGGTCCTTTGAGGATGGAAATTCATTTGATAAGAACACACAGCTCAATGTGGGTAAGGAACATTTCAGTGACAGTGATGCGATTAAAGACATGGGCCCTCAGATTGCTAATAGTTCTTATGATGACCCCGAGGCATGGTTTGCCAATGATCATGAAAATGTCACAGTTTCTGATGAGGGATCCAACATGGGTGATCCTATGATGCAAAGACATTATGAGGAAGAGGTAGCATTCACATCCTCTGAACCTGAGATGAATGACAGATTTGAGAGTGTCACCTCATTCTTTTGTGGAGGCTTGGGAGTAACATCACTGCGGAACAGATGGGCTGGCCCTGACCATTGGAAGTACCGAAAGCCTATGGGCCCAGACAACATCTTTGCTTCTGACGATGGGTTGGATTCTGCTGCGAAGAGGCCATGTAATAAAAAATCAAAAGAATTGGATATTGAATTCACAAGTTATTTGCATGAAGGATTGCCAGACATTTTTGCTCCTGCCAAGAATCCCAAATCTTTGCTGCTTCCTCCAAGAAAGATCCCATCTTCAAACACACTTCCAGAAGATTGTCATTATCAACCAGAGGATCTTGTCAGATTGTTTCTTCGTCCAGATATTATGTGCCTTGGGAAGAGAAGTCATCGTAGAGTGTCAGATAGTGATTTTGGGCACTGGCAAAATCATTGTGATGGATCACATTTGAACAAAGAAACTTCAGCTAGTGGCCTATTTGAGGATGAGTGTATTCACGGCGACTTAGAAGAGGATGAACTTGTGTCACAACCTCGTCAGGTTGATAAAGTTGAAGTTCAATATGATAAAAATTCAAAACAAGTTGATGTGCATTTGCTGAAGGAAACGCTTTGGAATCACATGCAAGGATCACTCCAGACACCTGAAAATGAAACAAGTTTTCTCACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_164562.p1 GENE.S_Transcript_164562~~S_Transcript_164562.p1 ORF type:3prime_partial len:614 (+),score=131.40,Cnd2|PF05786.10|8.6e-80,Cnd2|PF05786.10|1.8e-09 S_Transcript_164562:178-2016(+)
MTARVVQSPKSPFFLGSNDDQMERAAARAAHAAAVRRNPVEIAPAQQQPPPRPSLSSNSFLTRDQIIELFRNCYKLASENRINQKNTWELKLIDHISEIIKVDAEDHNHETNFQKASCTLEAGVKIYAARVDAWHADAYRVLSTISGAGFQDDQGSSVEGDKTSNERDVIRPKKETDRKVSPLSTVESSFEALNVKKFDVAFVVDPLYSQSSAQFDEGGANGLLLYNLGVYGRCWVLFDSKEVPAKCTRSTNVCTSSDLVDIFFAKECIDQLVINMRTEQHISPTLGDITKSLEEQYFLPRIFDGPGSFEDGNSFDKNTQLNVGKEHFSDSDAIKDMGPQIANSSYDDPEAWFANDHENVTVSDEGSNMGDPMMQRHYEEEVAFTSSEPEMNDRFESVTSFFCGGLGVTSLRNRWAGPDHWKYRKPMGPDNIFASDDGLDSAAKRPCNKKSKELDIEFTSYLHEGLPDIFAPAKNPKSLLLPPRKIPSSNTLPEDCHYQPEDLVRLFLRPDIMCLGKRSHRRVSDSDFGHWQNHCDGSHLNKETSASGLFEDECIHGDLEEDELVSQPRQVDKVEVQYDKNSKQVDVHLLKETLWNHMQGSLQTPENETSFLT

Click here to download the sequence:
Link to NCBI Protein BLAST