Transcript Information: S_Transcript_164563.p1


Annotated TAIR IDAT2G32590.1
Annotated Gene NameLOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13829420-13833209 | Reverse length=671
E-Value1E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97364638665294
Replicate 20.80717522771396
Replicate 31.0121013704415
Condition 2: 8 Hour
Replicate 11.9504930168109
Replicate 21.3641371121785
Replicate 32.9894176519181
Condition 3: 24 Hour
Replicate 10.13320050908899
Replicate 21.1055517842121
Replicate 30.61517181475893


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_164563.p1 GENE.S_Transcript_164563~~S_Transcript_164563.p1 ORF type:5prime_partial len:164 (-),score=30.82,Cnd2|PF05786.10|1.5e-38 S_Transcript_164563:793-1284(-)
CCTCCTCGTCCTTCTCTGTCCTCGAACTCCTTTCTTACTCGCGACCAGATCATCGAGCTCTTCCGTAACTGCTACAAGCTCGCCTCTGAGAATAGGATAAACCAGAAGAATACGTGGGAGTTGAAGCTGATTGATCATATAAGTGAGATCATCAAAGTTGATGCTGAAGATCATAACCACGAGACCAACTTTCAAAAGGCTAGTTGTACGTTGGAAGCTGGAGTGAAGATTTATGCCGCGAGGGTGGATGCCTGGCATGCTGATGCGTACAGAGTCCTTAGTACAATCAGTGGAGCTGGTTTTCAAGATGATCAAGGAATCTCGGTTGAAGGAGACAAGACCAGTAATGAGAGAGATGTGATTAGGCCGAAAAAGGAAACGGATAGAAAGGTTTCACCTTTGTCGACAGTGGAGTCATCTTTTGAAGCTTTGAATGTGAAGAAGTTTGATGGTCAGATTTCTTTCACTCTCTGTCCCTTCCCTCTTGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_164563.p1 GENE.S_Transcript_164563~~S_Transcript_164563.p1 ORF type:5prime_partial len:164 (-),score=30.82,Cnd2|PF05786.10|1.5e-38 S_Transcript_164563:793-1284(-)
PPRPSLSSNSFLTRDQIIELFRNCYKLASENRINQKNTWELKLIDHISEIIKVDAEDHNHETNFQKASCTLEAGVKIYAARVDAWHADAYRVLSTISGAGFQDDQGISVEGDKTSNERDVIRPKKETDRKVSPLSTVESSFEALNVKKFDGQISFTLCPFPLV*

Click here to download the sequence:
Link to NCBI Protein BLAST