Transcript Information: S_Transcript_164572.p1


Annotated TAIR IDAT3G14440.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 3
Annotated Gene Symbol(s)NCED3, ATNCED3, STO1, SIS7
Annotation TypeOrtholog
Chromosome Positionchr3:4831678-4833477 | Reverse length=599
E-Value1.7E-292
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.9535603048436
Replicate 21.4732481626353
Replicate 30.9912219719199
Condition 2: 8 Hour
Replicate 12.5006972358853
Replicate 23.0242075522758
Replicate 33.7493673311694
Condition 3: 24 Hour
Replicate 12.7750829190006
Replicate 24.6877916452705
Replicate 32.7522426305257


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_164572.p1 GENE.S_Transcript_164572~~S_Transcript_164572.p1 ORF type:complete len:614 (+),score=40.27,RPE65|PF03055.11|2e-99 S_Transcript_164572:101-1942(+)
ATGGCTTATGCAGGCACAGCAACAAGTAGTAGTACAAATATATGGGTAAAGCCGCAAATTGGCGGTCATCAGTCATTAGTAGTAGACATGGGCTCTGTCAATTGGCCGAATAGAAAACCCAACAACATTAATTGCTCTCTCCAATTGCCTTTGCTTGACTCTACTAAGAAATCATCAACAACACAACCAAGAATAGCGACAACACCATCGAAAAAATCTACTAAAACTACCATTATTTCTCCTCCTAAAACAGAGACAAAGAGCCCACCAAAATGGAACCCAATCCAGAAGGCAGCAGCTGCTGCCTTGGACATGGTAGAGCAAACCTTGAACATCCACGACAGCAAAACCCAGTTGCCTAAAACCTCCGACCCGAGAGTCCAGATCGCCGGAAATTTCTCTCCGGTGCCGGAGCAGCCCGTCAAGCGGAACCTCCCGGTGTCCGGGAAGATCCCGGAGTCTGTCCGAGGTGTTTACGTCAGGAACGGGGCGAACCCGCTATATGAGCCAGTGGCGGGGCACCACTTCTTCGACGGCGACGGAATGATCCACGCCGTAGAATTCCACCAGGACGGGTCCGCAAGCTATGCCTGCCGGTTCACGGAGACCAACCGCCTTGTCCAAGAGCGGACCTTGGGGCGGCCTATATTCCCCAAGGCCATTGGAGAGCTACATGGACACTCGGGCATAGCTCGCCTACTTCTATTCTACTCCAGGGCCGTTTTTGGTCTGCTTGATCACTCCAATGGAATTGGAGTGGCTAACGCAGGCCTTGTCTATTTCAACAATAGATTATTAGCTATGTCCGAAGATGACTTGCCTTACCAAGTCCGGGTCACCCCAACTGGGGACTTGAAAACTGTTGGCCGGTACGACTTCTCGGGTCAGCTCAAGTCAACCATGATTGCCCACCCGAAAGTCGACCCGGTTTCCGGGGAGATGTTTGCTTTAAGCTACGACGTCGTCAAGAAGCCGTACTTGAAATATTTCTGGTTCAATGCCGATGGTACCAAGTCAAAAGACGTCGAGATCAACCTCGAGTCTCCAACAATGATGCATGATTTCGCCATCACTGAGAAATCCGTCATAATTCCCGACAGTCAGGTCGTGTTCAAGCTCCAGGAGATGATTCGAGGCGGCTCGCCTGTCGTTTTCGACAAAGATAAGGTCTCCAGGTTCGGAATTCTACCAAAACATGCTGAAAGTTCGGATGAAATCCAATGGATTGACGTTCCAGATAGCTTCTGCTTTCACCTCTGGAACGCCTGGGAGGAGCCTGAAACCGATGAGGTGATCGTAATTGGGTCCTGCATGACTCCACCTGACTCCATCTTCAACGAATGTGACGAGACCCTCTCAAGTGTCTTATCTGAGATTCGGTTGAACCGGAAGACCGGCAAGTCCATCCGCCGGGAAATTCTATCCCAGTCCGACCAGATGAACCTCGAGGCCGGGATGGTGAACCGGAACAAATTAGGGGGGAAAACCCAGTTCGCTTACCTCGCCATTGCTGAGCCGTGGCCTAAAGTGTCAGGCTTTGCAAAGGTGGACCTCTTCACGGGTCAGGTGAAAAAATTCACCTACGGGGAGGAAAAATACGGTGGCGAACCATTTTTCCTCCCTAAGGACCCACAGCCATCATCAGAGTCCGAGATTAAAGAGGATGAGGGTTACATTTTAGCCTATGTTCACGATGAGAAGAACTGGAAATCAGAGCTCCAAATTGTGGATTCCTCAACAGTAGAGCTTGTGGCCACAGTTGAATTACCATCAAGGGTTCCTTATGGATTTCACGGCACTTTCATCAGTGCTAAGGATTTAAAAAGGCAAGCATATTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_164572.p1 GENE.S_Transcript_164572~~S_Transcript_164572.p1 ORF type:complete len:614 (+),score=40.27,RPE65|PF03055.11|2e-99 S_Transcript_164572:101-1942(+)
MAYAGTATSSSTNIWVKPQIGGHQSLVVDMGSVNWPNRKPNNINCSLQLPLLDSTKKSSTTQPRIATTPSKKSTKTTIISPPKTETKSPPKWNPIQKAAAAALDMVEQTLNIHDSKTQLPKTSDPRVQIAGNFSPVPEQPVKRNLPVSGKIPESVRGVYVRNGANPLYEPVAGHHFFDGDGMIHAVEFHQDGSASYACRFTETNRLVQERTLGRPIFPKAIGELHGHSGIARLLLFYSRAVFGLLDHSNGIGVANAGLVYFNNRLLAMSEDDLPYQVRVTPTGDLKTVGRYDFSGQLKSTMIAHPKVDPVSGEMFALSYDVVKKPYLKYFWFNADGTKSKDVEINLESPTMMHDFAITEKSVIIPDSQVVFKLQEMIRGGSPVVFDKDKVSRFGILPKHAESSDEIQWIDVPDSFCFHLWNAWEEPETDEVIVIGSCMTPPDSIFNECDETLSSVLSEIRLNRKTGKSIRREILSQSDQMNLEAGMVNRNKLGGKTQFAYLAIAEPWPKVSGFAKVDLFTGQVKKFTYGEEKYGGEPFFLPKDPQPSSESEIKEDEGYILAYVHDEKNWKSELQIVDSSTVELVATVELPSRVPYGFHGTFISAKDLKRQAYY*

Click here to download the sequence:
Link to NCBI Protein BLAST