Transcript Information: S_Transcript_164942.p1


Annotated TAIR IDAT5G58610.1
Annotated Gene NamePHD finger transcription factor, putative
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23686771-23691053 | Reverse length=1065
E-Value5E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7169678216246
Replicate 22.0164915186976
Replicate 30.59492697043873
Condition 2: 8 Hour
Replicate 11.2611789972498
Replicate 21.924460098041
Replicate 31.2606146433054
Condition 3: 24 Hour
Replicate 11.0570104914804
Replicate 21.9495751893632
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_164942.p1 GENE.S_Transcript_164942~~S_Transcript_164942.p1 ORF type:5prime_partial len:186 (+),score=36.88 S_Transcript_164942:2-559(+)
GATGATGCTGTTCCCTTGGAAGTTCAAAAGTACAAATCAGTTGACAGAAGAAAAGAACTGATGATGCAAAGGCCAAAGAAGGATGGCATTGTGATGAGGCTTCCCCTCCGTAGGCAGCGAAGAACTGTAAGAATATCTAGGCGATGCATCCGAAAGAAAAGAAGTCCCTTGAAGATAAAAAAGATAATCCCAAGAAAAATTGAGAACGCTAATATGAAACCAAAACCTCCACTACAGGAAGAGCTTGAAGCATCTAAATCCTTACAGAAAGATGATGATTCTTTGGACAGTCATTGCCGAGGGGTTCCTCCTGTTACAGCTTCAGATCAAGTGTCTATACCTGAAGATACTTTAAGTAGTCCTCAAAAACAGAAGGGTAAGAGAGGTAGATGCCGAGATTCAGTTTGCTTTGTCTGTCAGTATGGAGGTGAACTTTTTCACTGTGATCACTGCATGTCTTCATACCATTTGAACTGCGTTGACCTCAAGGGTTTTGACTTAGACAGTTTTATTTCAACCTATTATGGTGTTGAAGACCCCAAGGATTCAACAACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_164942.p1 GENE.S_Transcript_164942~~S_Transcript_164942.p1 ORF type:5prime_partial len:186 (+),score=36.88 S_Transcript_164942:2-559(+)
DDAVPLEVQKYKSVDRRKELMMQRPKKDGIVMRLPLRRQRRTVRISRRCIRKKRSPLKIKKIIPRKIENANMKPKPPLQEELEASKSLQKDDDSLDSHCRGVPPVTASDQVSIPEDTLSSPQKQKGKRGRCRDSVCFVCQYGGELFHCDHCMSSYHLNCVDLKGFDLDSFISTYYGVEDPKDSTT*

Click here to download the sequence:
Link to NCBI Protein BLAST