Transcript Information: S_Transcript_16512.p1


Annotated TAIR IDAT3G02060.1
Annotated Gene NameDEAD/DEAH box helicase, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:354409-358319 | Forward length=823
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.794325705998
Replicate 225.511629166838
Replicate 328.788661203669
Condition 2: 8 Hour
Replicate 136.172779584494
Replicate 236.236442198049
Replicate 334.644160298118
Condition 3: 24 Hour
Replicate 122.958924112066
Replicate 220.528086538665
Replicate 322.565620659566


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16512.p1 GENE.S_Transcript_16512~~S_Transcript_16512.p1 ORF type:complete len:902 (+),score=185.42,Helicase_C|PF00271.27|2.8e+02,Helicase_C|PF00271.27|2.7e-16,DEAD|PF00270.25|1.8e-16,DEAD|PF00270.25|4.1e+02,CarD_CdnL_TRCF|PF02559.12|4.8e-14,ResIII|PF04851.11|1.1e-07,ResIII|PF04851.11|69,TRCF|PF03461.11|2.5e-06 S_Transcript_16512:242-2707(+)
ATGGCTACTACCAAACTCCCAGTATCAGATTTCATCATCAAGTTCAAGTCTTTCCCACAAAGCTTGTCTCTTCTTTTCATATCCCCAAAATGCCCTTGTCACTTTAAGCACAAAAGACCCCAATTTCCAGCCTGCAAAGCAGTGTACACGGAAGGGGCTTCACCAGCCAAATTGGGTCAAGGAAAGGACCCTTTTTCTGATTGGGAAAGTGACCCAATTGCAATCTTGAATGAGAGGATCCACAAGGATCATGGGTCCCGAGGCGGGTCGAAATCGAGTATGGATTCTGAGGAAGCTGATAAGTATATCAAGCTTGTGAAGGAGCAGCAGCAAAGAGGGTTGCAGAAATTGAAGGGGAATGATGGGGCAGGAAAAGGTGGTGGTGGGATTATTAGTTATAAGGTGGATCCTTATACATTGAAAAATGGGGATTATGTGGCTCATAAGAAAGTGGGTATTGGGAGGTTTGTTGGGATTAAGTTTGATGTACCAAAACATGGGTCTGAGCCTATTGAATATGTTTTTATTGAGTATGCTGATGGTATGGCTAAGCTTCCTGTAAAGCAGGCGTCTCGCATGCTCTACCGATATAATCTTCCAAACGAATCAAAAAGACCACGAACACTTAGTAAATTAAGTGACCCGAGTGCATGGCAACGGAGGAGGACAAAAGGGAAGGTTGCTGTCCAGAAAATGGTAGTTGACTTGATGGAACTATATTTACATAGGCTAAAACAGAGAAGACCTCCATATCCAAAAAGTCCTGCAATGGGGGAATTTGCTGCTCAGTTTCCTTATGAGCCCACACCAGATCAGAAAAAGGCTTTTTCTGATGTTGAGAAGGATCTGACTGAGAGAGAAACTCCAATGGACAGACTCATATGTGGAGATGTTGGATTTGGCAAGACAGAAGTCGCATTACGTGCTATATTTTGTGTTGTTTCTGCAGGAAAACAAGCTATGGTTCTTGCACCGACTATTGTATTAGCTAAACAGCATTTTGATGTTATTTCAGAGAGGTTTTCCAAGTATCCTAATATCAAGGTTGGGCTTTTAAGCAGATTTCAGACCAAAGGAGAGAAAGAGGAATATTTACGCATGATTAAAAATGGTGAACTCGACATTATTGTGGGAACTCATTCACTTCTTGGAAATCGTGTTGTTTACAATAATTTGGGTCTCCTTGTGGTTGATGAAGAGCAGAGGTTTGGTGTCAAGCAAAAGGAGAAGATAGCTTCATTCAAAACTTCTGTTGATGTTCTCACACTTTCGGCAACACCAATACCACGAACACTTTATCTAGCTTTGACCGGGTTTCGTGATGCTAGTCTCATTTCTACACCTCCTCCAGAAAGAGTCCCTATTAAGACAAAGCTTTCAGCATTCAGTAAAGAAAAAGTTGTATCAGCAATTAAATTTGAACTGGACAGAGGTGGTCAAGTATTTTATGTTCTCCCTCATATAAAAGGACTTAAAGAAATTATGGGTTTTCTAGAACAATCCTTCCCAGATGTTGAAATAGCCATTGCTCATGGGAAGCAATACTCAAGACAGCTTGAGGATACAATGGAGAAATTTGCTCAAGGAGAGATAAAAATCCTTATTTGTACTAATATAGTGGAGAGTGGCTTGGATATTCAAAACGCAAACACCATTGTTATTCAGGATGTTCAGCAATTTGGACTTGCACAGTTATATCAGCTGCGAGGAAGGGTGGGGAGAGCAGATAAGGAAGCATATGCATACTTATTTTACCCTGATAAATCTCTGCTGTCTGATCAAGCACTGGAAAGACTCGCAGCACTTGAGGAGTGCCGTGACCTTGGCCAAGGCTTCCAGCTTGCTGAAAGAGACATGGGAATAAGAGGCTTTGGCAATATCTTTGGTGAGCAGCAAACGGGTGATGTAGGAAATGTGGGCATTGATCTGTTTTTTGAGATGCTTTTTGAGAGCTTGTCCAAGGTTGAAGAGCACCGTATAATATCCATTCCTTATCATGAAGTTCAGCTCGATATAAACATAAACCCTCATCTCCCTTCAGATTACATAAATTATCTGGACAATCCCATGGAATTATTAAATGAAGCTGAGAAGGCAGCAGAGAAAGATACCTCAAGTTTGGCACAATTTACAGAGAATTTGCGGCGCCAATATGGAAAAGAGCCTTACTCAATGGAGATTCTTTTAAAGAAGCTGTACGTAAAAAGAATGGCTGCAGACCTTGGTATTAACCGAATCTATACTGCAGGAAAGATGGTTGCTATGGAAACAAACATGACCAAGAGTGTATTCAGACTCATACAAGACTCTATGGTTTCTGATGTTCTGCGTAGTTCACTGATATTTGAAGAGGGACAAATAAAGGCTGAACTACTACTAGAACTGCCGAGGGAGCAACTCCTTAACTGGGTCTTTCAGTGTTTAGCAGAACTTCATGCTTCTTTGCCAACCCTCATCAAGTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16512.p1 GENE.S_Transcript_16512~~S_Transcript_16512.p1 ORF type:complete len:902 (+),score=185.42,Helicase_C|PF00271.27|2.8e+02,Helicase_C|PF00271.27|2.7e-16,DEAD|PF00270.25|1.8e-16,DEAD|PF00270.25|4.1e+02,CarD_CdnL_TRCF|PF02559.12|4.8e-14,ResIII|PF04851.11|1.1e-07,ResIII|PF04851.11|69,TRCF|PF03461.11|2.5e-06 S_Transcript_16512:242-2707(+)
MATTKLPVSDFIIKFKSFPQSLSLLFISPKCPCHFKHKRPQFPACKAVYTEGASPAKLGQGKDPFSDWESDPIAILNERIHKDHGSRGGSKSSMDSEEADKYIKLVKEQQQRGLQKLKGNDGAGKGGGGIISYKVDPYTLKNGDYVAHKKVGIGRFVGIKFDVPKHGSEPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNESKRPRTLSKLSDPSAWQRRRTKGKVAVQKMVVDLMELYLHRLKQRRPPYPKSPAMGEFAAQFPYEPTPDQKKAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVISERFSKYPNIKVGLLSRFQTKGEKEEYLRMIKNGELDIIVGTHSLLGNRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIKTKLSAFSKEKVVSAIKFELDRGGQVFYVLPHIKGLKEIMGFLEQSFPDVEIAIAHGKQYSRQLEDTMEKFAQGEIKILICTNIVESGLDIQNANTIVIQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLSDQALERLAALEECRDLGQGFQLAERDMGIRGFGNIFGEQQTGDVGNVGIDLFFEMLFESLSKVEEHRIISIPYHEVQLDININPHLPSDYINYLDNPMELLNEAEKAAEKDTSSLAQFTENLRRQYGKEPYSMEILLKKLYVKRMAADLGINRIYTAGKMVAMETNMTKSVFRLIQDSMVSDVLRSSLIFEEGQIKAELLLELPREQLLNWVFQCLAELHASLPTLIKY*

Click here to download the sequence:
Link to NCBI Protein BLAST