Transcript Information: S_Transcript_16546.p1


Annotated TAIR IDAT2G44980.2
Annotated Gene NameSNF2 domain-containing protein / helicase domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18552343-18556669 | Reverse length=877
E-Value5.3E-182
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1660202465565
Replicate 26.9159296184704
Replicate 36.7582653198183
Condition 2: 8 Hour
Replicate 19.7917906974915
Replicate 29.9759678261033
Replicate 310.446176971978
Condition 3: 24 Hour
Replicate 17.3298505310603
Replicate 25.303231847887
Replicate 37.4051476951003


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16546.p1 GENE.S_Transcript_16546~~S_Transcript_16546.p1 ORF type:complete len:453 (+),score=115.83,Helicase_C|PF00271.27|5.1e-08 S_Transcript_16546:1496-2854(+)
ATGGATTCAGAATCTGATGGACACAGTCCATTTGTCTTTCTGATATCAACTAGAGCTGGTGGAGTTGGTCTGAATCTCATGGCTGCAGACACGGTTGTATTTTATGAGCAAGATTGGAATCCTCAGGTGGACAAACAGGCTTTGCAGCGGGCACATAGGATTGGGCAGATGAATCATGTTTTGTCTATAACCCTTGTTACAGGGCACTCTGTAGAGGAGGTCATCATGCAAAGAGCACTAAGAAAGTTACAGCTTAGTAATGATGTTGTTGGCAATGAAGTTTCAGAGCATGTAGGTAAAGAACTCTCAGGGGCTGATTCTGGCGACTTGAAGTCAATGATATATGGATTGCGTTTATTTGATCCAGAAGAGAGTAGTAAAGAAAAAATGGGTGAACCAAATATGTCAGAATTGAGTATGATGACTGAGAAAGTACTTGCCAAGCGCTTTGGGCAGAAATCAGATGAGGATGTGGGGAAGCTTGAGTCAATTCAAATTAGTCTTAGTGGAAGTGATTTTAGATTGGAGAGGACTGATGCAACTATTGGTCTTGATCCTGGTCTCGACGAAGCTTCTTACCGTTCTTGGGTTGAAAGATTCAAGGAGCTAGCAGAATCGAATGATAATCCTTCCTCAGAATTGGAAAGTAGTAGAGTGTCATCTGAGGAAAAACGTCAGAGGCTTGAAGCTGCTAGAAAGAAAGCAGAGGAAAAGAAGTTGGCTAAGTGGCAAACCCTTGGGTATCAATCACTTTCTATCCTTGATCCAGTACTGCCAGCTTATTCTGATATCATGTCAGATCGCGGTGCTGTAAACTTTGTTTTGGGGGATTGTACGCATCCATCTGATGTGTGTCCATCTGAGCCTACTATTATCTTCAGCTGTGTTGATAACTCGGGAAACTGGGGCCACAGAGGAATGTTTGATGCATTGGCTAGACTCTCCACTAAAGTTCCAGAAGCGTATGAACGAGCATCTGAATTCGGGGACCTTCGTCTGGGTGATCTTCATCTCATACGAGTAGATGATGATTGTGATGAGCAGCTTGTGGATGGCAAGAAGCCTCAGTGGGTTGCTTTGGCTGTTGTGCAATCATACAATTCCAGGCGTAAGGTTCCACGCAGTGAAATATCTATCAGTGAGTTGGAACGTTGCCTATCAAAAGTGTCTTCTGCTGCTCTTCAGAATTCAGCCTCGATCCACATGCCACGAGTTGGATATCAAGATGGATCAGACCGAGCTGTTTGGTATTCCACTGAGCGTCTTTTACGAAAATATGCCTCCATATTTGGCATTCAGATATATGTGTACTACTACAGAAAGTCCCGAAGTGCTGAAGATGCTATTGCCACGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16546.p1 GENE.S_Transcript_16546~~S_Transcript_16546.p1 ORF type:complete len:453 (+),score=115.83,Helicase_C|PF00271.27|5.1e-08 S_Transcript_16546:1496-2854(+)
MDSESDGHSPFVFLISTRAGGVGLNLMAADTVVFYEQDWNPQVDKQALQRAHRIGQMNHVLSITLVTGHSVEEVIMQRALRKLQLSNDVVGNEVSEHVGKELSGADSGDLKSMIYGLRLFDPEESSKEKMGEPNMSELSMMTEKVLAKRFGQKSDEDVGKLESIQISLSGSDFRLERTDATIGLDPGLDEASYRSWVERFKELAESNDNPSSELESSRVSSEEKRQRLEAARKKAEEKKLAKWQTLGYQSLSILDPVLPAYSDIMSDRGAVNFVLGDCTHPSDVCPSEPTIIFSCVDNSGNWGHRGMFDALARLSTKVPEAYERASEFGDLRLGDLHLIRVDDDCDEQLVDGKKPQWVALAVVQSYNSRRKVPRSEISISELERCLSKVSSAALQNSASIHMPRVGYQDGSDRAVWYSTERLLRKYASIFGIQIYVYYYRKSRSAEDAIATD*

Click here to download the sequence:
Link to NCBI Protein BLAST