Transcript Information: S_Transcript_165476.p1


Annotated TAIR IDAT4G32060.1
Annotated Gene Namecalcium-binding EF hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15501134-15503321 | Forward length=498
E-Value3E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.31706709599313
Condition 2: 8 Hour
Replicate 11.5887110264913
Replicate 21.9230815449622
Replicate 31.3436923991679
Condition 3: 24 Hour
Replicate 10.25037115748532
Replicate 20.19481786455313
Replicate 30.50588627746651


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_165476.p1 GENE.S_Transcript_165476~~S_Transcript_165476.p1 ORF type:complete len:349 (+),score=60.71,EF-hand_1|PF00036.28|0.00011,EF-hand_1|PF00036.28|2.3e-07,EF-hand_6|PF13405.2|0.0077,EF-hand_6|PF13405.2|5.1e-07,EF-hand_6|PF13405.2|1e+02,EF-hand_5|PF13202.2|0.001,EF-hand_5|PF13202.2|5.4e-06,EF-hand_7|PF13499.2|0.011,EF-hand_7|PF13499.2|0.00019,EF-hand_8|PF13833.2|6.7e+03,EF-hand_8|PF13833.2|0.00088,EF-hand_8|PF13833.2|0.0044 S_Transcript_165476:190-1236(+)
ATGCATTCATCTTCACCATTGTTAAGAAAATCATCACCATTTATCCGTCAGATCATCCTCACACCTCATGGTGGGCCCCAGGTTCGGCTATTCGCCTGTGCACCTGAGCCTTCCATCTCATCATCATCGTTATCAGGTGGGTGTAAGGACAAAGGTACAAAGACAGGAAATTGGAATGCTGATAAAACAACCATCAATGTTGAACAATCTTCACATGTAATGAGATGGCTCTCTTCTGGGCTTTTCCTTGTTGGGTCGGGTTTGGGCCTGTGTTACTGGACCGCTACTCCGGCCTATGCAGATCAGCCCGCAGCAGCCGCTAGTGGGTTGTCGGATTTTGCGGAAGCTGCCCCTCAGAAGAAGCCTACCTTCTTGTTTAAAGATGAATATAGGAAGAGAGTCTTCTTTAACTATGAGAAGCGCATCAGACTGCGAAGCCCCCCTGAGAAGGTTTTCGAGTACTTTGCATCTATTCGATCTCCAAGCGGAGAAGCCTTCATGACACCAGGGGATTTGATGAGGGCAGTTGTTCCAGTTTTTCCTCCTTCAGAATCTAACTATGTCAGAGGTGGAAATTTGATGGGGGAGCGCCCTCCTGGAGAGTTGCAGTGTGCTCCTTCAGGGTTTTTCATGCTATTTGATACTAACAACGATGGCCTCATATCCTTTTCCGAGTACATCTTTTTGGTCACCCTTCTTAGTATTCCAGAATCAAACTTTTCAGTGGCTTTCAAAATGTTCGACTTAGATCATAATGGAGAAATAGACAGGGAGGAATTTAAGAAGGTGATGTCTTTGATGCGAATGTACAACAGACAAGGGAGACAGCATAGTAATGGCCGGCGTTTTGGATTCAAAGTTGCTACTTCTGTTGAAAATGCTGGAGTAATTGAGTATTTCTTTGGTAAAGATGGAACAAATTTTCTTCGGCATGACAGATTTGTTCAGTTTTTAAGAGATTTGCATGATGAAGTATGTGGGACTCTCTCCCCATCTCACATTTCAGGCTTAAAAATCTTTACTCCTGTACATCTTAGATTGAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_165476.p1 GENE.S_Transcript_165476~~S_Transcript_165476.p1 ORF type:complete len:349 (+),score=60.71,EF-hand_1|PF00036.28|0.00011,EF-hand_1|PF00036.28|2.3e-07,EF-hand_6|PF13405.2|0.0077,EF-hand_6|PF13405.2|5.1e-07,EF-hand_6|PF13405.2|1e+02,EF-hand_5|PF13202.2|0.001,EF-hand_5|PF13202.2|5.4e-06,EF-hand_7|PF13499.2|0.011,EF-hand_7|PF13499.2|0.00019,EF-hand_8|PF13833.2|6.7e+03,EF-hand_8|PF13833.2|0.00088,EF-hand_8|PF13833.2|0.0044 S_Transcript_165476:190-1236(+)
MHSSSPLLRKSSPFIRQIILTPHGGPQVRLFACAPEPSISSSSLSGGCKDKGTKTGNWNADKTTINVEQSSHVMRWLSSGLFLVGSGLGLCYWTATPAYADQPAAAASGLSDFAEAAPQKKPTFLFKDEYRKRVFFNYEKRIRLRSPPEKVFEYFASIRSPSGEAFMTPGDLMRAVVPVFPPSESNYVRGGNLMGERPPGELQCAPSGFFMLFDTNNDGLISFSEYIFLVTLLSIPESNFSVAFKMFDLDHNGEIDREEFKKVMSLMRMYNRQGRQHSNGRRFGFKVATSVENAGVIEYFFGKDGTNFLRHDRFVQFLRDLHDEVCGTLSPSHISGLKIFTPVHLRLN*

Click here to download the sequence:
Link to NCBI Protein BLAST