Transcript Information: S_Transcript_16548.p1


Annotated TAIR IDAT2G44980.2
Annotated Gene NameSNF2 domain-containing protein / helicase domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18552343-18556669 | Reverse length=877
E-Value2.6E-164
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6854900782281
Replicate 22.4269068513266
Replicate 31.5983704605787
Condition 2: 8 Hour
Replicate 13.3409778163508
Replicate 24.2506512415481
Replicate 32.7710601886476
Condition 3: 24 Hour
Replicate 12.6213860188713
Replicate 22.4930192733982
Replicate 31.8496165897085


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16548.p1 GENE.S_Transcript_16548~~S_Transcript_16548.p1 ORF type:3prime_partial len:300 (+),score=61.33,Helicase_C|PF00271.27|5.3e+03,Helicase_C|PF00271.27|1.5e-17,SNF2_N|PF00176.19|2.8e-17,HDA2-3|PF11496.4|2.2e-08 S_Transcript_16548:796-1692(+)
ATGACTGGTACACCCATTCAAAATAATCTAACAGAACTGTGGGCATTGATGTATTTCTGCATGCCTTCAATCTTCGGGACATTGGAGCAGTTTGTGAACACATTTAAGTCTGTTGGAGATGCTTCAGCAGGGCATGATAGCGTGCAAGTCAAGGAAAAGCTCCACACATTGAAGTCTATACTTGGGGCTCTTATGCTTCGCAGGACGAAATCCAAGCTTGTTGAATGTGGAAGCCTTGTGCTGCCTCCTCTTACTGAAGTTACAGTGATGGTTCCACTTGTAGCCTTGCAGAAGAGTGTTTATACATCAATCTTGAGGAAAGAGCTCCCTAAACTTCTCGCTTTTGCTTCTGGAACTTCTGGTGTCCAATCATTACAGAATATTGTAATCCAGCTGCGAAAGGCTTGCAGCCACCCTTACCTCTTCCCTGGAATTGAACCTGAACCGTACGAAGAGGGTGAACACCTTGTCCAGGCCAGTGGTAAACTTCTGATGTTGGATCAACTTCTTCAGAAGCTGCACGAGTCCAGACATCGTGTTCTTCTTTTTGCTCAGATGACTCACACACTTGATATATTACAGGATTATCTAGAGTTGAGACATTACACTTATGAACGCCTGGATGGATCCATTCGGGCAGAGGAACGATTTGCTGCAATAAGAAATTTCAGCCGTCAATCAACCTCTGGGAATATGGATTCAGAATCTGATGGACACAGTCCATTTGTCTTTCTGATATCAACTAGAGCTGGTGGAGTTGGTCTGAATCTCATGGCTGCAGACACGGTTGTATTTTATGAGCAAGATTGGAATCCTCAGGTGGACAAACAGGCTTTGCAGCGGGCACATAGGATTGGGCAGATGAATCATGTTTTGTCTATAACCCTTGTTACAGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16548.p1 GENE.S_Transcript_16548~~S_Transcript_16548.p1 ORF type:3prime_partial len:300 (+),score=61.33,Helicase_C|PF00271.27|5.3e+03,Helicase_C|PF00271.27|1.5e-17,SNF2_N|PF00176.19|2.8e-17,HDA2-3|PF11496.4|2.2e-08 S_Transcript_16548:796-1692(+)
MTGTPIQNNLTELWALMYFCMPSIFGTLEQFVNTFKSVGDASAGHDSVQVKEKLHTLKSILGALMLRRTKSKLVECGSLVLPPLTEVTVMVPLVALQKSVYTSILRKELPKLLAFASGTSGVQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLLMLDQLLQKLHESRHRVLLFAQMTHTLDILQDYLELRHYTYERLDGSIRAEERFAAIRNFSRQSTSGNMDSESDGHSPFVFLISTRAGGVGLNLMAADTVVFYEQDWNPQVDKQALQRAHRIGQMNHVLSITLVTG

Click here to download the sequence:
Link to NCBI Protein BLAST