Transcript Information: S_Transcript_16552.p1


Annotated TAIR IDAT5G53440.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21683679-21687970 | Reverse length=1181
E-Value5.4E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7566120300116
Replicate 29.0694353046831
Replicate 39.9330843671741
Condition 2: 8 Hour
Replicate 19.4282556183969
Replicate 29.740762956391
Replicate 39.3525069609104
Condition 3: 24 Hour
Replicate 110.849136767141
Replicate 29.5446589021194
Replicate 38.9715996877259


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16552.p1 GENE.S_Transcript_16552~~S_Transcript_16552.p1 ORF type:3prime_partial len:1192 (+),score=337.87 S_Transcript_16552:443-4015(+)
ATGCCGAGAAGTTCGAGGCACAAATCTAGCAAGCATAGTTCAAGGGAAACGAGAGATTATTCTGATTCGGAGAAAGATTCTGGATTGAAAGACAAGAAAGGGAGAGGAGATGAAGGTGGCGGCGGCGGCGGCGGGAGTAGTATCAGTAGTAGCAGGCATTTCAAGGAATCATCTGCATCTGGTGAGAAGAGAAAGGTGGTTGAGTCGTCGAAATCCTCGATTGATTTCGTTAAGGATTCGGGGAATGTAGAGTATATCGATGAGTATGCTCCTTCATCCTCTTCTAAGAAGAGGAAAGAGAAGGTTGATGATGATAGGTGGACTGGAGGGGATAACAATAATGAGCACGAGATGTCGAAAACTGATTTGCTGAAGAATTCGAGTGATTCGAAGAGGTCGAGTAGGAGAGATGAAGTGGTGGGGGTTGATGGGGAGGAAGGGAAGAGATCGAGTGGGAGTAAAGTGGATTCGAAGCATCATAGGTCGGAGAGGAAAGATAGGGGAGAGAAAGAAGGGATGTCGGAACGCGAGAGGAAGGGGGGGAGTAATAGCAGTAGTAAGAGTGAGAAATTGGTGATGGTGGTTGATGGTGTTTTGGCAAGTGAGAGTGAAGGAGGGAGTAAGAAACAAGGCGGCTCCGGTGAGGAGCGTGGGGGAAAGCATGCCGTTGGTAATACTGATCTTAATGTACAAGATGAATTTCGGAACCCTGAGTCAGGAAGAGAGCTTGATCGACGAGTCAGGAGGAAAAGAGATGGCTCAGGTGATGGGAACAAGCATCAGGATAGTGTTCGTGAACCTGATGACAGAAGAATCTCATCTAGGGATGATATTGCCAAGTCAGGACGGTATAAAGAAGACAATCATAAGGATGACAGAATTCGAGACAAACACCGAGAAGACGTGGACAAGGACAATTCACAACAGGATGAAAAGCAGAGGGACAGCCAGTCTTCGAGAGATTACGCTCGTGGGAGGTCTGCTGATAGGCAAGTGAGAAATGAGAAAAAGGAGCTTGATGTGTCACAGAAAAAGTCTAAGCTACATCACAGTGAATATGAGCGAGAGCGAGAGCGAGAGCGGGAGCGTGATCGAGACAGAGACCGAGACCGTGATCGTGGCCGTCATGACCATGATCGTGACCGTGATAGAGAGCATGATGATCGGGACAATGATCTTGATCGTGACCGAGACCGTGACCTTGACCGTAGTTATGATCGAGACCGTGAACTTGATCGGGACAGGGAACGCGGCCGTGATCGCTACCGGCGTGAGCGTGACAGGGAATGGGTTCGTGATCGTGATCACAACCATGAACGAGGCCGAGACCGGGATTATGATCATGATCATGATCATGATTATGGCTCTCATGTGGATGAGAAAGGTTCTAGGTACAAGGAAGAAAGAGGTCGGAGAAGATCTCCGGATGGCTACGATGAGTATCACAGTGATAGAGCCAGAAGGATCGAGTCTGAGGTTGATAGAGACAGATCTTTATCTCGTAAAGCTCATGTGGACACTGTCACCAGTAGCAGTAGACGCAGGACCTCACCTAGCTCCAGGTCATACGTGGGCACTGATAAATATAGAGATGGAGTGCAAGATGAGATCAAGTATGGAGATTCTGTGAGGGATGGTACCAGTTTGTCTGAAGCAGTTGATAAAGTTCCCAAGTATCGATCAGGGGAGAAGCGTTTGAAGTTTGATGACAATCACATTGGAGAAATACCTGAAAGGTCCCCGAGTACGAAGGCATCGCCTGCAGGTTTTAAGGAAAGATCCCCTTCTACAACCAGTGTAGATCGTAGATTTAGATCTAGCAGGAGGAGGAGCCTTGATGTTGATGAGGCTGAGAGGAGGAGTTGTGGTTCGAATGACTTAAGAGATGGTCCTGTAACTGAGGACAGACAAGGTAGAGATTTTTCTGCAAAGAAGCCTTTGGCAGATGATTATTCTCAACCAGAATCACATTTTTACCATAAATCTAGTCAAGGTAATGTTTCTTCCCATGGTCTTGGTCCTGGTCCATCTGGCTTCAGGGCAGGCGCAGACAGTCCATCCTTCATTGGATCCATGGGAGAAGAAAGTAGAGGTCACTCTGGCAGCCGTTATAGGAGAAGTGCTGATCCGAACATGGGAAGAGGTCCTGGGAATGCGTGGAAAGGTGTGCCCAATTGGCCTTCACCATTACCTAATGGCTTCATGCCCTTTCCTCCTGGGCCTCCTGGGCCGCATCATGGGGGTTTTCCACCTATGATGTCACAATTTCCTCCTATTTTTGGTGTTAGGCCTTCTTTGGAAATGAACCATACTGGGATTCCGTATCATATGACTGATGCAGATCGTTTTCCTGGTCATGTACGGCCTATGGGATGGCAGAATATGGTAGATGGATCAGTTCCTCATTTTCATGGATGGGATGCAAATAATGGTGTCCTCAGGGATGAATCTTCCATGTATGGGCCTGGGCATCCATCAAGTGGTCGAGGAAGGGAATCAAATGCAGACATATGGAAGCCCAATGGTGATGTGATTACGGATGTTACTTCTGGGTCACAGAAAGATGCACCTATGGTTAAAGCGTCTACAGATGAAGCATTTTCTGCACAAGGTGCTTCAAGGCCTCATCATGAGAGTAGTTGCATTGATGACCATGGGACAAGCATCAAAAAAAATACATCTAGTGGCCCATCATCCACAAAAGATGTTCCAATGACTCCAACTAAAGCGACTACTGAGAAAACTCCTGAGTCATTTAGTGTTGATGACACAACAAATTATTTGCGCACCTATCTTGCTAAGCTTGATATTTCAATAGATCTGGCTGATCCAGAGTTGTATAATCAGTGTATTAACATTGGTGTGAAGGGGCAGGCTGAGTATGCCGAAGACGATGTTGAACTTGACTATGTCAAGGAAAAAGAAGCTAATGAGTCAGAGGTCACAAATCTGACGATGGGCCTGGCAATATTCCCTGATCCAAAAGATTCTATCTTTCAGAGGGCAATGGAGCTGTACAAGACCCAGAGCACTGAAAGGAGATCATCTGTAACTGCAATGTTTAATGGGGAGATGTTGCAGCGTTCTCCAGCAGAGAAGCTGCATAGTCCTCTGGTTGAAGCACCTCAGCTGGAGGTAAAGCAAATCTTGGGTGCTAATGAGCAATTAGATAGCTCTGTTGAGTGCGGTGTCCAACTGGAAGAACCAACTCTCGAGGTGGCAGATTCGGCTCCAATCACTGCTGAGGAGGAAGGGAAGAATACTGTACCCATAAACAGTGAAGAAGGGCCAACTAGTGTACCTTCTTTGGAGAGTATGGATCTGCCCTTGGATGTCGGGAATGAAAGCGAAATACCTGTTGTTAACGTGGAGGTGATGGAGGAAAAAATCTCCGGAGAAATGATGTCTGAGAACAATGATGATGATAAGGGTCAAAATGATACCGTTGATACAAATGCTGACATAGATATTGTTGGTAGTGAGTGTAAGACTGGTGGTGCAGAGTCGGCTTCAAAGACCGGTGGTGCAGAGCCGGCTTCTGATGAACAGTTGGATGTTGCTGTAAGTGGTCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16552.p1 GENE.S_Transcript_16552~~S_Transcript_16552.p1 ORF type:3prime_partial len:1192 (+),score=337.87 S_Transcript_16552:443-4015(+)
MPRSSRHKSSKHSSRETRDYSDSEKDSGLKDKKGRGDEGGGGGGGSSISSSRHFKESSASGEKRKVVESSKSSIDFVKDSGNVEYIDEYAPSSSSKKRKEKVDDDRWTGGDNNNEHEMSKTDLLKNSSDSKRSSRRDEVVGVDGEEGKRSSGSKVDSKHHRSERKDRGEKEGMSERERKGGSNSSSKSEKLVMVVDGVLASESEGGSKKQGGSGEERGGKHAVGNTDLNVQDEFRNPESGRELDRRVRRKRDGSGDGNKHQDSVREPDDRRISSRDDIAKSGRYKEDNHKDDRIRDKHREDVDKDNSQQDEKQRDSQSSRDYARGRSADRQVRNEKKELDVSQKKSKLHHSEYERERERERERDRDRDRDRDRGRHDHDRDRDREHDDRDNDLDRDRDRDLDRSYDRDRELDRDRERGRDRYRRERDREWVRDRDHNHERGRDRDYDHDHDHDYGSHVDEKGSRYKEERGRRRSPDGYDEYHSDRARRIESEVDRDRSLSRKAHVDTVTSSSRRRTSPSSRSYVGTDKYRDGVQDEIKYGDSVRDGTSLSEAVDKVPKYRSGEKRLKFDDNHIGEIPERSPSTKASPAGFKERSPSTTSVDRRFRSSRRRSLDVDEAERRSCGSNDLRDGPVTEDRQGRDFSAKKPLADDYSQPESHFYHKSSQGNVSSHGLGPGPSGFRAGADSPSFIGSMGEESRGHSGSRYRRSADPNMGRGPGNAWKGVPNWPSPLPNGFMPFPPGPPGPHHGGFPPMMSQFPPIFGVRPSLEMNHTGIPYHMTDADRFPGHVRPMGWQNMVDGSVPHFHGWDANNGVLRDESSMYGPGHPSSGRGRESNADIWKPNGDVITDVTSGSQKDAPMVKASTDEAFSAQGASRPHHESSCIDDHGTSIKKNTSSGPSSTKDVPMTPTKATTEKTPESFSVDDTTNYLRTYLAKLDISIDLADPELYNQCINIGVKGQAEYAEDDVELDYVKEKEANESEVTNLTMGLAIFPDPKDSIFQRAMELYKTQSTERRSSVTAMFNGEMLQRSPAEKLHSPLVEAPQLEVKQILGANEQLDSSVECGVQLEEPTLEVADSAPITAEEEGKNTVPINSEEGPTSVPSLESMDLPLDVGNESEIPVVNVEVMEEKISGEMMSENNDDDKGQNDTVDTNADIDIVGSECKTGGAESASKTGGAEPASDEQLDVAVSGP

Click here to download the sequence:
Link to NCBI Protein BLAST