Transcript Information: S_Transcript_165596.p1


Annotated TAIR IDAT3G16190.1
Annotated Gene NameIsochorismatase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5489883-5491195 | Reverse length=196
E-Value1.3E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.862449483747
Replicate 210.130872756002
Replicate 39.0331768572737
Condition 2: 8 Hour
Replicate 120.346163210734
Replicate 218.833444007933
Replicate 314.899342458584
Condition 3: 24 Hour
Replicate 19.5849998989342
Replicate 28.4411134952722
Replicate 38.2357696016706


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_165596.p1 GENE.S_Transcript_165596~~S_Transcript_165596.p1 ORF type:complete len:196 (+),score=43.14,Isochorismatase|PF00857.16|1.3e-38 S_Transcript_165596:97-684(+)
ATGGCTACTAAATGGAAGAACACGGCTCTTCTGGTCATCGACATGCAAAAAGACTTCATATTGCCAGGTGGGCAACTGGTAGTAGATGGTGGTGCAGCCATTGTCCCTAATGTTATTAAAGCTGTTCAAGTTGCAAGACAGCGTGGCATGCTTGTAGTTTGGGTTGTTCGCGAGCATGATGCATTAGGGAGAGACGTTGAACTCTTTCGCAGGCACTTATATAATGATGGGAAGATCGGGCCTACTGTTAAGGGACATGAAGGTGCAGAACTTGTTGATGGACTTGAGATCCATGAAGGGGACTATAAGTTGGTCAAGACACGCATGAGTGCGTTCTTTGCTACACACCTTCCTTCTTTTCTTCAGTCTGCTGGAATTGATAGCTTAGTTATTGTTGGAGTACAAACACCCAACTGCATCAGGCAGACAGTCTTTGATGCGGTAGCACTAGATTATCGTTCTGTCTCTGTTATAGTTGATGCTACAGCTGCGAAGACTCCAGAAGTTCATGCTGCTAATATCTTCGACATGAAAAATATTGGAGTAGCAACTCCAACCTTGGAGGCATGGTGCAAAGTAGATGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_165596.p1 GENE.S_Transcript_165596~~S_Transcript_165596.p1 ORF type:complete len:196 (+),score=43.14,Isochorismatase|PF00857.16|1.3e-38 S_Transcript_165596:97-684(+)
MATKWKNTALLVIDMQKDFILPGGQLVVDGGAAIVPNVIKAVQVARQRGMLVVWVVREHDALGRDVELFRRHLYNDGKIGPTVKGHEGAELVDGLEIHEGDYKLVKTRMSAFFATHLPSFLQSAGIDSLVIVGVQTPNCIRQTVFDAVALDYRSVSVIVDATAAKTPEVHAANIFDMKNIGVATPTLEAWCKVDD*

Click here to download the sequence:
Link to NCBI Protein BLAST