Transcript Information: S_Transcript_165600.p2


Annotated TAIR IDAT3G16190.1
Annotated Gene NameIsochorismatase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5489883-5491195 | Reverse length=196
E-Value1.4E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3024204685816
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.24233398087651
Replicate 20.25422555272417
Replicate 30.72667662289709
Condition 3: 24 Hour
Replicate 10.49647462478623
Replicate 20.77262994010275
Replicate 31.7196848458034


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_165600.p2 GENE.S_Transcript_165600~~S_Transcript_165600.p2 ORF type:complete len:88 (+),score=15.46,Isochorismatase|PF00857.16|4.1e-09 S_Transcript_165600:29-265(+)
ATGGCTACTAAATGGAAGAACACGGCTCTTCTGGTCATCGACATGCAAAAAGACTTCATATTGCCAGGTGGGCAACTGGTAGTAGATGGTGGTGCAGCCATTGTCCCTAATGTTATTAAAGCTGTTCAAGTTGCAAGACAGCGTGGCATGCTTGTAGTTTGGATTAGTATTTCCATCCCCTGCACACGTCAAAGTAAAGGAGGAGGAGAGACAGTGGGTGGTCTTGGTCTTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_165600.p2 GENE.S_Transcript_165600~~S_Transcript_165600.p2 ORF type:complete len:88 (+),score=15.46,Isochorismatase|PF00857.16|4.1e-09 S_Transcript_165600:29-265(+)
MATKWKNTALLVIDMQKDFILPGGQLVVDGGAAIVPNVIKAVQVARQRGMLVVWISISIPCTRQSKGGGETVGGLGLC*

Click here to download the sequence:
Link to NCBI Protein BLAST