Transcript Information: S_Transcript_165608.p1


Annotated TAIR IDAT3G16190.1
Annotated Gene NameIsochorismatase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5489883-5491195 | Reverse length=196
E-Value7E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6639389960153
Replicate 29.6139529915428
Replicate 38.2425636127824
Condition 2: 8 Hour
Replicate 110.603127029189
Replicate 212.498239463534
Replicate 315.71894907183
Condition 3: 24 Hour
Replicate 15.9798843074811
Replicate 28.2298757120814
Replicate 39.017937664399


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_165608.p1 GENE.S_Transcript_165608~~S_Transcript_165608.p1 ORF type:5prime_partial len:179 (+),score=33.41,Isochorismatase|PF00857.16|1.1e-23 S_Transcript_165608:1-537(+)
AAAGACTTCATATTGCCAGGTGGGCAACTGGTAGTAGATGGTGGTGCAGCCATTGTCCCTAATGTTATTAAAGCTGTTCAAGTTGCAAGACAGCGTGGCATGCTTGTAGTTTGGGTTGTTCGCGAGCATGATGCATTAGGGAGAGACGTTGAACTCTTTCGCAGGCACTTATATAATGATGGGAAGATGGGCCTACTGTTAAGGGACATGAAGGTGCAGAACTTGTTGATGGACTTGAGATCCATGAAGGGGACTATAAGTTGGTCAAGACACGCATGTGCGTTCTTTGCTACACACTTTCATTCTTTTCTTCAGTCTGCTGGAATTGATAGCTTAGTTATTGTTGGAGTACAAACACCCAACTGCATCAGGCAGACAGTCTTTGATGCGGTAGCACTAGATTATCGTTCTGTCTCTGTTATAGTTGATGCTACAGCTGCGAAGACTCCAGAAGTTCATGCTGCTAATATCTTCGACATGAAAAATATTGGAGTAGCAACTCCAACCTTGGAGGCATGGTGCAAAGTAGATGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_165608.p1 GENE.S_Transcript_165608~~S_Transcript_165608.p1 ORF type:5prime_partial len:179 (+),score=33.41,Isochorismatase|PF00857.16|1.1e-23 S_Transcript_165608:1-537(+)
KDFILPGGQLVVDGGAAIVPNVIKAVQVARQRGMLVVWVVREHDALGRDVELFRRHLYNDGKMGLLLRDMKVQNLLMDLRSMKGTISWSRHACAFFATHFHSFLQSAGIDSLVIVGVQTPNCIRQTVFDAVALDYRSVSVIVDATAAKTPEVHAANIFDMKNIGVATPTLEAWCKVDD*

Click here to download the sequence:
Link to NCBI Protein BLAST