Transcript Information: S_Transcript_165675.p1


Annotated TAIR IDAT2G15790.1
Annotated Gene Namepeptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase
Annotated Gene Symbol(s)SQN, CYP40
Annotation TypeOrtholog
Chromosome Positionchr2:6878144-6880743 | Reverse length=361
E-Value2.8E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0789468035369
Replicate 27.8795676991124
Replicate 36.422024171968
Condition 2: 8 Hour
Replicate 19.5202635344344
Replicate 212.584164859846
Replicate 38.5644030555729
Condition 3: 24 Hour
Replicate 14.4860028596756
Replicate 26.8800856571055
Replicate 33.6031492007309


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_165675.p1 GENE.S_Transcript_165675~~S_Transcript_165675.p1 ORF type:5prime_partial len:112 (-),score=29.68,Pro_isomerase|PF00160.17|5.7e-22 S_Transcript_165675:258-593(-)
GGGGGCAGGCCAAAGTGTTATTTGGACATAAGCATTGGAGGAGAACTTGAAGGCCGGATTGTGGTTGAGTTGTATGATGATGTTGTTCCCAAAACTGCTGAGAATTTCAGGGCTCTTTGTACTGGTGAAATGGGCATTTCCCCCCACTCTTCTCTTCCTCTTCACTACAAGGGTGTACGTTTCCATCGGATTATTAAAGGGGCACTGATTCAAGGTGGAGACATATCAGCTGGAGGTGAAAGTGGTGGAGAGTCCATCTATGGTCCGCGTTTTGATGATGAAAATTTTGAGCTGAGGCATGAGCGGAAGGGAATGTTATCCATGGTCAGTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_165675.p1 GENE.S_Transcript_165675~~S_Transcript_165675.p1 ORF type:5prime_partial len:112 (-),score=29.68,Pro_isomerase|PF00160.17|5.7e-22 S_Transcript_165675:258-593(-)
GGRPKCYLDISIGGELEGRIVVELYDDVVPKTAENFRALCTGEMGISPHSSLPLHYKGVRFHRIIKGALIQGGDISAGGESGGESIYGPRFDDENFELRHERKGMLSMVSF*

Click here to download the sequence:
Link to NCBI Protein BLAST