Transcript Information: S_Transcript_165822.p1


Annotated TAIR IDAT5G02030.1
Annotated Gene NamePOX (plant homeobox) family protein
Annotated Gene Symbol(s)LSN, PNY, HB-6, BLR, RPL, BLH9, VAN
Annotation TypeOrtholog
Chromosome Positionchr5:395754-398872 | Forward length=575
E-Value3.6E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3879261318803
Replicate 26.1528241505281
Replicate 33.7737611788226
Condition 2: 8 Hour
Replicate 13.8357550240388
Replicate 23.359469020157
Replicate 35.8389945584602
Condition 3: 24 Hour
Replicate 14.0373382028821
Replicate 23.1789174653293
Replicate 35.2858079858907


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_165822.p1 GENE.S_Transcript_165822~~S_Transcript_165822.p1 ORF type:complete len:606 (+),score=77.47,POX|PF07526.7|1.7e-33,Homeobox_KN|PF05920.7|1.5e-18,Homeobox|PF00046.25|2.1e-07 S_Transcript_165822:359-2176(+)
ATGGAAATGAGCAATTTTCTACCGGAGCTACACGTGGCGCAGCAAAGCCGGCGAGAGAAGCTGAGAGTTCCGTCAACGTCCACGTCAACACCACCACAACAGCAACCACATGAGCATTTCGACGACGATCTCCTACCGCCACCGGGTGGACCCCCGTTAGCTTTACCCTTGGACACAATGATGAATTACGACGCTACCCCTGCCACCACCACTACCACCATCCACCATCCGGCCCGCTTTGCGGTCCCCACTATCTGCGAAAACTGGGCCATACCTTGCTACGTCGACTATGAAAACGATCAAGATCAAAGGAGGATGTTTCCACAAGGGATTTTCAACAATAATAATAACGAGTTGCCGTTATTACCCTCCTTTGTTGGGGGTAATAACGAGACTAGTACCCCTCAGGCCGGCAGCCTCTCGCTTACGTTGTCGTCAAACCAAATCCGTCAACCGGAACCCGGTACCATATCGTCGGTGGTGGACCAGATGGTCAGTAGGATCAGAGGAGGAGGAGGGGGTGGAAATCAGCAGGCCCAAGATACAGCCCATTTGTATAGGAATGTTGGGCCTCTTGGGCCTTTCACTGGGTACACTACCATCTTGAGGAACTCCAAGTTCTTGAAGCCAGCTCAGCTTCTTTTGGAGGAGTTTCTAAATGCGGCTGGTTTGAGGATCAATATCATGAAAGAGTGTGAGGTGGAAGCTGAGAGCAATAACATCAACAATGGCGGCTCCAAATCTCGGTGCTCCATTAGTAATGATCAGTTGAGTAGCGGTGGGAGTGGTTCATGTGAGTCGTACAAGCCCGACTGTCATGAAAAGAAAGCTAAGCTTCTTCACATGCAAGAAGAGGTTTGCAAAAGGCACAAGCAGTATCATCAACAAATGCAAATGGTAATGTCAGCTTTTGAATCAGTCCCAGGACTTGGGAATGCGACTCCCTATATTTCTCGGTCAGTTAAGATCATATCCAGGCCTTTTAGATGTATCAAGAACGCAATTGCTGATCAACTCAAGCACATAAAGAAAGCTTTAGGCGAGGACCTTTCGTCTTCTATCCAGGCACTAAAGGGTGAAAGCACGAGTTTGAGGTTTGATCGGAGTTTCTCTACTAAAGTCAAAGCTAGCAGTGGTGGAATGGGCTATGGTCATCAAAACCATATCTGGAGACCTCAAAGAGGCTTGCCAGAGCGTGCCGTTTCTATCCTTAGAGCTTGGCTGTTTGATCATTTTCTTCATCCGTATCCAACTGACACAGATAAACAAATGCTAGCTACTCAAACAGGCTTATCTCGAAACCAGGTGTCTAATTGGTTCATTAATGCACGAGTGCGTTTATGGAAGCCTATGGTAGAAGAAATACACATGCTTGAAACCAAGGGTGCTGTGGCACGCTCTGATTCCAATTTGGAAAACGCTGGAATGTCCATGGTGGTGAGCAACAGGTACGGAGCTGGCAACCAACCTGCAGGTTGCAAGCAAGCTGTGAACGTGATGTTTGATAAGCGGTTTGAGTACTTGGGGGGATCATCGAGTTCCTTGGATGCATCTAGAGGAGAGACGAGCTCTGAACAAATCTTTCAAAAGCGTTCAAGGTTGGAATCTCATCAAATCCCGAACAGCATGGATGGTTCTTTAATTGGTTTTTTACCTTACCAAAGACGTGGACTCGAGATTGGAGGGATTGGTGCCGTGTCGCTTACCTTGGGCCTTAGGCATGGTTCTGAGACTAGTCAGCAGCAGCTACAGCATCATCAATTCCCACAGCAAGGCTTGCATTTTGGAAGTCATGTCATCCATGATTTTTCAGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_165822.p1 GENE.S_Transcript_165822~~S_Transcript_165822.p1 ORF type:complete len:606 (+),score=77.47,POX|PF07526.7|1.7e-33,Homeobox_KN|PF05920.7|1.5e-18,Homeobox|PF00046.25|2.1e-07 S_Transcript_165822:359-2176(+)
MEMSNFLPELHVAQQSRREKLRVPSTSTSTPPQQQPHEHFDDDLLPPPGGPPLALPLDTMMNYDATPATTTTTIHHPARFAVPTICENWAIPCYVDYENDQDQRRMFPQGIFNNNNNELPLLPSFVGGNNETSTPQAGSLSLTLSSNQIRQPEPGTISSVVDQMVSRIRGGGGGGNQQAQDTAHLYRNVGPLGPFTGYTTILRNSKFLKPAQLLLEEFLNAAGLRINIMKECEVEAESNNINNGGSKSRCSISNDQLSSGGSGSCESYKPDCHEKKAKLLHMQEEVCKRHKQYHQQMQMVMSAFESVPGLGNATPYISRSVKIISRPFRCIKNAIADQLKHIKKALGEDLSSSIQALKGESTSLRFDRSFSTKVKASSGGMGYGHQNHIWRPQRGLPERAVSILRAWLFDHFLHPYPTDTDKQMLATQTGLSRNQVSNWFINARVRLWKPMVEEIHMLETKGAVARSDSNLENAGMSMVVSNRYGAGNQPAGCKQAVNVMFDKRFEYLGGSSSSLDASRGETSSEQIFQKRSRLESHQIPNSMDGSLIGFLPYQRRGLEIGGIGAVSLTLGLRHGSETSQQQLQHHQFPQQGLHFGSHVIHDFSG*

Click here to download the sequence:
Link to NCBI Protein BLAST