Transcript Information: S_Transcript_165947.p1


Annotated TAIR IDAT4G17840.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9918222-9920190 | Reverse length=422
E-Value1.3E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.472675136733
Replicate 218.214628588181
Replicate 318.013835244447
Condition 2: 8 Hour
Replicate 111.406604123118
Replicate 215.087990943071
Replicate 315.119380277952
Condition 3: 24 Hour
Replicate 118.54274993969
Replicate 222.663811576347
Replicate 317.010215994148


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_165947.p1 GENE.S_Transcript_165947~~S_Transcript_165947.p1 ORF type:complete len:86 (-),score=6.70 S_Transcript_165947:500-757(-)
ATGGTGGTACTGGCTGGTGTACTGCCTCCATTCGTACCATTTGCTCAGGCATTTGCAGCCGTCATTACAGCTGCACTTACAGGTTCTCTCTATTATATAGCTGCCTCACCGAAAGATCCCACATATGTGGTAGCACCTGTTTTAGAATCTCGCTCTGGCCGCTGGGATTTGAAGAAGCTCTTTTCAGGTCGGTTATGTTTCTCCAAATTTTACTGTTGTCTCTCGCTAGTTTCAAATACTTGTTCATGCATTTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_165947.p1 GENE.S_Transcript_165947~~S_Transcript_165947.p1 ORF type:complete len:86 (-),score=6.70 S_Transcript_165947:500-757(-)
MVVLAGVLPPFVPFAQAFAAVITAALTGSLYYIAASPKDPTYVVAPVLESRSGRWDLKKLFSGRLCFSKFYCCLSLVSNTCSCIY*

Click here to download the sequence:
Link to NCBI Protein BLAST