Transcript Information: S_Transcript_166178.p1


Annotated TAIR IDAT5G56120.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12870.1); Has 77 Blast hits to 75 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22721483-22722193 | Forward length=236
E-Value1.8E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.930947272597
Replicate 22.721401355112
Replicate 32.1123838686062
Condition 2: 8 Hour
Replicate 13.4759446772419
Replicate 21.3797615901153
Replicate 33.2865844324861
Condition 3: 24 Hour
Replicate 10.48116483459458
Replicate 21.3977681148408
Replicate 33.1110891777236


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_166178.p1 GENE.S_Transcript_166178~~S_Transcript_166178.p1 ORF type:complete len:227 (+),score=49.71 S_Transcript_166178:183-863(+)
ATGGCAGAAAAGAAAGATAGCATCCACATAGTGGAAATCCCAGTTGATCATCAAGGAGAAGGAAACAACAGCTTGACCCTGTCAATATCGACAGCAATCCAGCAGCACCCGCTGATGGAAATATCCCAGAGCCCTGGTCATCTGTTGCTCCTCAAGCTGTGGCAAAGGGAAGAAGATCTCTTTGCCCGTCGAATCTCCATCAAGGAAACCCGTTTGGATACAATCCGAAGAGAGATCTTTCAGCTCTGCTGTTTCTTCTTCCTTTTTCATGGCTTCTTCTCCACCATCCTCTTCATGTCTTCTGTAGACATGAAAGATCATCTGTACATGAGATGTAAGAAATGGTGGGTCCCTTCCATTCTGTCAATAGCTACATCATTGGCCATTGTAGTTTTGGTGCAGATGAAGCTGTACAGGTACTGGAAGGTGGCAGGTCGAGTGCAGAGAGAGATTGGAGACAACAGGACACTGACAAGGTGCATTCAGGAGTTGAGGATGAAAGGGGCCAGTTTTGAGCTTTCCAAGGAGCCTCACTTGAATAGCAAGAGGCTCAAGAGCTCCAGTGTTGAGATCAAGTGGAAACCCATCTCCTGGTGTTCTCATTATTTAGTTACCCTTTGCCTTGTTCTCTTTGCAGCTCTTGCATTTCCTGCTCCCAAGCTCTTCCTCTGCATCTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_166178.p1 GENE.S_Transcript_166178~~S_Transcript_166178.p1 ORF type:complete len:227 (+),score=49.71 S_Transcript_166178:183-863(+)
MAEKKDSIHIVEIPVDHQGEGNNSLTLSISTAIQQHPLMEISQSPGHLLLLKLWQREEDLFARRISIKETRLDTIRREIFQLCCFFFLFHGFFSTILFMSSVDMKDHLYMRCKKWWVPSILSIATSLAIVVLVQMKLYRYWKVAGRVQREIGDNRTLTRCIQELRMKGASFELSKEPHLNSKRLKSSSVEIKWKPISWCSHYLVTLCLVLFAALAFPAPKLFLCIF*

Click here to download the sequence:
Link to NCBI Protein BLAST