Transcript Information: S_Transcript_166782.p1


Annotated TAIR IDAT5G40860.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16370470-16371985 | Forward length=246
E-Value3E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.362663241805
Replicate 227.50080106817
Replicate 327.923860971649
Condition 2: 8 Hour
Replicate 139.421936325686
Replicate 238.441768085164
Replicate 339.254184145793
Condition 3: 24 Hour
Replicate 131.075115951409
Replicate 229.446994618564
Replicate 335.168766142345


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_166782.p1 GENE.S_Transcript_166782~~S_Transcript_166782.p1 ORF type:complete len:284 (-),score=46.23 S_Transcript_166782:179-1030(-)
ATGGGATCATGTGCATCAATCCATAAAAGTTCAGGGCCTGCTCTGAAACTACAGATGTCTTCAATCATACCTGATGAAAAATCGGAGAAAACCACCCCTGTCATTGTTGACTGTCCGATAAATTCTCACTCACTTCGTTTTAAGTCTCAAGTTTCTCCTTTCAACTCTGTTTCCAGTTACCGTAGTTATGGTGGAAGTAAGGATGAAATCTTTTACGATAGCCAAGCTTGGCTAGACTCAGATTGTGAGGATGATTTTCATAGTGTAAATGGAGATTTCACCCCCTCCCGAAATAGTACTCCAGTCCATAGTGCGATAGGGAGCTCGCGATTCAGTAGAACATTTTCACCTCAAGTCAATAAGGCTCTTTTTGATGGCAAACCACCTCGTAGCGCATCAAACAGATCTAGAGGCAGTACTCCACTTCATCGGAGCAGTTCAGCCTCTGCTACTGATCAAGTTAATGGACCGAATCTTCTTGAAGGCAAGTCTCCTTTAAATCCAGATTTATCCTCAACAACAACAACAACAACAACGTCTAAGAAGAAGAAGAAACTTGCTGATCTTTTCCGAGAAAGCATCAGGGAGCGTAATGGTTTCGCCTTCAATGAAGATGATGATAATATTATGAGTAGTACTTCTCCAGCGTTGCCACCCAAATCAGTTAATGGAACACCGTCATATGTTTCGGGCACCAATTCAGTGTCCAGCAGTGGGAAAAGAACCCCTTTAAGTACTGATGATTATTCAGGTCCTTGTCAGAAGGACAAACCACTCAAGGCTAAGGCTGCACAATGCTGCTTTCCCAGATTGGTTTCGAGTCGCAGCCTTCGATCGAAAGATGAAGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_166782.p1 GENE.S_Transcript_166782~~S_Transcript_166782.p1 ORF type:complete len:284 (-),score=46.23 S_Transcript_166782:179-1030(-)
MGSCASIHKSSGPALKLQMSSIIPDEKSEKTTPVIVDCPINSHSLRFKSQVSPFNSVSSYRSYGGSKDEIFYDSQAWLDSDCEDDFHSVNGDFTPSRNSTPVHSAIGSSRFSRTFSPQVNKALFDGKPPRSASNRSRGSTPLHRSSSASATDQVNGPNLLEGKSPLNPDLSSTTTTTTTSKKKKKLADLFRESIRERNGFAFNEDDDNIMSSTSPALPPKSVNGTPSYVSGTNSVSSSGKRTPLSTDDYSGPCQKDKPLKAKAAQCCFPRLVSSRSLRSKDED*

Click here to download the sequence:
Link to NCBI Protein BLAST