Transcript Information: S_Transcript_16684.p2


Annotated TAIR IDAT4G32600.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15724010-15725737 | Forward length=453
E-Value3E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.336234947558
Replicate 210.686663691921
Replicate 37.3963056168606
Condition 2: 8 Hour
Replicate 112.328741277092
Replicate 211.885044589855
Replicate 311.546084119365
Condition 3: 24 Hour
Replicate 19.4433610922881
Replicate 29.0891327675977
Replicate 310.903279612628


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16684.p2 GENE.S_Transcript_16684~~S_Transcript_16684.p2 ORF type:complete len:192 (+),score=11.93,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.7e-13,zf-RING_11|PF17123.1|5e+03,zf-RING_11|PF17123.1|4.2e-10,zf-RING_11|PF17123.1|2e+03,zf-rbx1|PF12678.3|1.2e-06,zf-C3HC4|PF00097.21|9.9e+02,zf-C3HC4|PF00097.21|5.2e-07,zf-C3HC4_3|PF13920.2|1.9e+03,zf-C3HC4_3|PF13920.2|26,zf-C3HC4_3|PF13920.2|3.3e-06,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|4.3e-06 S_Transcript_16684:902-1477(+)
ATGCCCTTGGTTGCTAGTGCTTTTATAGACTTTATGTTTTATCCTTGTATGACTAGAATACCAATCGGAAACTGCACTTTTGTCAGGTTATGTATAGTGTTCCTCATCTTCAGCTGTATTGGATATGCTATGCCATTTATACTATGTGCAACAATTTGCTGCTGCCTGCCATGCATAATATCAGTTCTAGGCTTTAGAGAAGATTTAAACCAAACCAGGGGAGCGACGACTGAGTCGATAAATGCTTTGCCTACCTACAAATTTAAGCTGAAAAAAAGCAGAAGCAATGATAGTGCTGGTGAAGCAGGGGTTGTCGCTGCAGGAACAGAAAAGGAGCGAGTGATATCAGGAGAAGATGCAGTTTGTTGCATTTGCTTAGCGAAATATGCAAACAACGAAGAATTACGGGAGCTGCCATGCTCCCATTTGTTTCACAAGGATTGTGTAGATAAATGGCTGAAGATCAATGCGAATTGTCCCCTTTGCAAGAGCGAAGTGGGTGATACGTTTTTCAGTTCACTTGTTGAAGCAACCGCGAGCCTAAGAAGAGCTGAAAGTAGGGTGAATAGCAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16684.p2 GENE.S_Transcript_16684~~S_Transcript_16684.p2 ORF type:complete len:192 (+),score=11.93,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.7e-13,zf-RING_11|PF17123.1|5e+03,zf-RING_11|PF17123.1|4.2e-10,zf-RING_11|PF17123.1|2e+03,zf-rbx1|PF12678.3|1.2e-06,zf-C3HC4|PF00097.21|9.9e+02,zf-C3HC4|PF00097.21|5.2e-07,zf-C3HC4_3|PF13920.2|1.9e+03,zf-C3HC4_3|PF13920.2|26,zf-C3HC4_3|PF13920.2|3.3e-06,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|4.3e-06 S_Transcript_16684:902-1477(+)
MPLVASAFIDFMFYPCMTRIPIGNCTFVRLCIVFLIFSCIGYAMPFILCATICCCLPCIISVLGFREDLNQTRGATTESINALPTYKFKLKKSRSNDSAGEAGVVAAGTEKERVISGEDAVCCICLAKYANNEELRELPCSHLFHKDCVDKWLKINANCPLCKSEVGDTFFSSLVEATASLRRAESRVNSS*

Click here to download the sequence:
Link to NCBI Protein BLAST