Transcript Information: S_Transcript_16685.p1


Annotated TAIR IDAT4G32600.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15724010-15725737 | Forward length=453
E-Value3.6E-168
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.260602106887
Replicate 215.068525268885
Replicate 314.487650489915
Condition 2: 8 Hour
Replicate 121.623647524366
Replicate 220.911681362542
Replicate 321.216473024072
Condition 3: 24 Hour
Replicate 119.146098350731
Replicate 214.580913741426
Replicate 319.519157907922


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16685.p1 GENE.S_Transcript_16685~~S_Transcript_16685.p1 ORF type:complete len:429 (+),score=65.23,zf-RING_2|PF13639.2|1.5e+04,zf-RING_2|PF13639.2|5.6e-13,zf-RING_11|PF17123.1|1.2e-09,zf-RING_11|PF17123.1|6.1e+03,zf-rbx1|PF12678.3|3.1e-06,zf-C3HC4|PF00097.21|4.1e+03,zf-C3HC4|PF00097.21|1.7e-06 S_Transcript_16685:102-1388(+)
ATGGCCATTTGGTCTGCACAACCACATCAGGAAAGACAAATTGATAAATACTCATTAGCGATGGACCAACCAGAAAGAAATAATGAGAGTGAGCATGTGATTGACATAAGGAGAAGTGTTGAGGTGGCCTCTTCTAGTTCTGTTCATGGTAGAATTTCAGATGATAACCCTACTCAAAATGAAGATAGGCCTTCTAGTAGTGCAAGAGCCTCAATATCCCAGCTGTCACTTCCCCTTCCCAACATCTCGAACTCTAGGAATTCATCTTTTAGCAGAAGAGGGAATGGAAATGGTCATGCTCGAAGGCGAAGGAGTCCATTGAATTCAGTGTTGTGGATATCTGTTGAACTAGTACTTATATTGGCACAGATTTTGGCATCAATCATAGTTCTTTCTTTGTCGAGGCATGAGCACCCGCATACCCCTTTGTTTGCTTGGATTCTGGGTTATGCTGGAGGATGTGTTGTAACTCTCCCTCTTCTGTATTGGCGTTATCTTCATCGCAATCAAGGTTCTGAAGAAGATTCTACTCAATCCCATCAAGGTTCTAGCGGTAGCTCTTCTGTTGGACATTACTTTCCGCGCAATGCTTCCCAGGCTCCTGAAGATGACAGTAGGACCTCAAACAGAAGCCCAAGTGGTCTCATTGCTAGACTGCGCAACAATGCCAGGGTTAAGGCATTCGTGGAGTACTACAAGATGGGTCTGGATTGCTTCTTTGCAATTTGGTTTGTGGTTGGTAATGTGTGGATCTTTGGGGGTCATGCTTCTGCGTCTGATGCTCCCAACTTGTACAGGTTATGTATAGTGTTCCTCATCTTCAGCTGTATTGGATATGCTATGCCATTTATACTATGTGCAACAATTTGCTGCTGCCTGCCATGCATAATATCAGTTCTAGGCTTTAGAGAAGATTTAAACCAAACCAGGGGAGCGACGAGTGAGTCGATTAATGCTTTGCCTACCTATAAATTTAAGTTGAAAAAAAGCAGAAACAATGATGGTGCTGGTGAAGCAGGGGTAGTTGCTGCAGGAACAGAAAAGGAGCGAGTGATATCAGGAGAAGATGCAGTTTGTTGCATTTGCTTAGCGAAATATGCAAACAACGAAGAATTACGGGAGCTGCCATGCTCCCATTTGTTTCACAAGGATTGTGTAGATAAATGGCTGAAGATCAATGCGAATTGTCCCCTTTGCAAGAGCGAAGTGGGTGATACGTTTTTCAGTTCACTTGTTGAAGCAACCGCGAGCCTCAGAAGAGCCGAAAGTCGGGTGAATAGCAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16685.p1 GENE.S_Transcript_16685~~S_Transcript_16685.p1 ORF type:complete len:429 (+),score=65.23,zf-RING_2|PF13639.2|1.5e+04,zf-RING_2|PF13639.2|5.6e-13,zf-RING_11|PF17123.1|1.2e-09,zf-RING_11|PF17123.1|6.1e+03,zf-rbx1|PF12678.3|3.1e-06,zf-C3HC4|PF00097.21|4.1e+03,zf-C3HC4|PF00097.21|1.7e-06 S_Transcript_16685:102-1388(+)
MAIWSAQPHQERQIDKYSLAMDQPERNNESEHVIDIRRSVEVASSSSVHGRISDDNPTQNEDRPSSSARASISQLSLPLPNISNSRNSSFSRRGNGNGHARRRRSPLNSVLWISVELVLILAQILASIIVLSLSRHEHPHTPLFAWILGYAGGCVVTLPLLYWRYLHRNQGSEEDSTQSHQGSSGSSSVGHYFPRNASQAPEDDSRTSNRSPSGLIARLRNNARVKAFVEYYKMGLDCFFAIWFVVGNVWIFGGHASASDAPNLYRLCIVFLIFSCIGYAMPFILCATICCCLPCIISVLGFREDLNQTRGATSESINALPTYKFKLKKSRNNDGAGEAGVVAAGTEKERVISGEDAVCCICLAKYANNEELRELPCSHLFHKDCVDKWLKINANCPLCKSEVGDTFFSSLVEATASLRRAESRVNSS*

Click here to download the sequence:
Link to NCBI Protein BLAST