Transcript Information: S_Transcript_166911.p1


Annotated TAIR IDAT5G12080.1
Annotated Gene Namemechanosensitive channel of small conductance-like 10
Annotated Gene Symbol(s)MSL10, ATMSL10
Annotation TypeHomolog
Chromosome Positionchr5:3898182-3900923 | Reverse length=734
E-Value1E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1088750514659
Replicate 20.22982072455745
Replicate 30.19211183420417
Condition 2: 8 Hour
Replicate 10.81451143572383
Replicate 20.38840014999525
Replicate 30.44408015843711
Condition 3: 24 Hour
Replicate 10.75850289897896
Replicate 20.3147751607826
Replicate 30.78818888765988


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_166911.p1 GENE.S_Transcript_166911~~S_Transcript_166911.p1 ORF type:5prime_partial len:288 (+),score=43.57,MS_channel|PF00924.14|5.5e-11 S_Transcript_166911:1-864(+)
CCAAAATCTGACTTCTTCTCCCTCCTTCTCCTCCCTTCCTCCATTCCAAGTATGAACAAACAAAAGGACAAAAGCAAAACACTCATTGACTGGCTATCCGAGGAGACTGATAACATGCCAATGAACAATGCAGAAGATGTCGCACATTACATGGCCAAGATTTTCAACTATCATGACACAATAGTTCGTGGCATAACAAATAATAAGAGTCTTTTTGAAGCACTGAATATATATGCAAATGTGGTTCTTGCCTTTGCAATGTTCTCGCTGTGGCTAGTAATATTTTCTCCTGCGACGGCACAAATCATAGTCATCATTGGCTCAACAGTTATAGCTTCACAACTTACGGGCAATGCAGTCCAAAGGATGCTAAAAAATTTTGCTTTCATATTTGTGATTCATCCCTATGATGTTGGTGACTACTGTCTAATTGATGGCACTCTGATGATAATTGAAGAGATATACATCAATACAACAGTTGCTACAAATGCTCAAAGTCGAAGACAACATTACCCCAATGCTTTTTTGTCTTCCCAATCTATCAGCAACTATACGAGAAGCCCTCCTGAGATGCCTGATTCCTTGGTGTTTTACCTTCATATGGATTCATCCTTAGAGAAACTTAATCATGTTGAAGAGAAATTTCACAGTTATATATTAAGTAATCAAAATCACTGGCATCCTGAGCACAATTGGGTGGTGAAGTTGGATGATGATAACAAGCTAAAGGTGACTTTACAATTCCACCATCGAATTGATTATCATGAATTCAAAGTAAGACAGGAGCGAGAAATCAAGCTGCTTTCGGAACTCAAAAATGATTTCCATGATGAAGGACTAAGGTTTCATGGATCAAAGGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_166911.p1 GENE.S_Transcript_166911~~S_Transcript_166911.p1 ORF type:5prime_partial len:288 (+),score=43.57,MS_channel|PF00924.14|5.5e-11 S_Transcript_166911:1-864(+)
PKSDFFSLLLLPSSIPSMNKQKDKSKTLIDWLSEETDNMPMNNAEDVAHYMAKIFNYHDTIVRGITNNKSLFEALNIYANVVLAFAMFSLWLVIFSPATAQIIVIIGSTVIASQLTGNAVQRMLKNFAFIFVIHPYDVGDYCLIDGTLMIIEEIYINTTVATNAQSRRQHYPNAFLSSQSISNYTRSPPEMPDSLVFYLHMDSSLEKLNHVEEKFHSYILSNQNHWHPEHNWVVKLDDDNKLKVTLQFHHRIDYHEFKVRQEREIKLLSELKNDFHDEGLRFHGSKD*

Click here to download the sequence:
Link to NCBI Protein BLAST