Transcript Information: S_Transcript_167050.p1


Annotated TAIR IDAT3G11460.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3608250-3610121 | Forward length=623
E-Value2.9E-237
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29998552116951
Replicate 20.1776392073874
Replicate 30.83155653839101
Condition 2: 8 Hour
Replicate 12.1634453944918
Replicate 21.4770463675182
Replicate 32.2997774388627
Condition 3: 24 Hour
Replicate 10.35176946039604
Replicate 20.58393073304599
Replicate 30.73107375087293


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_167050.p1 GENE.S_Transcript_167050~~S_Transcript_167050.p1 ORF type:complete len:621 (+),score=104.19,PPR|PF01535.16|1.9e+03,PPR|PF01535.16|0.045,PPR|PF01535.16|0.00027,PPR|PF01535.16|0.055,PPR|PF01535.16|2e-06,PPR|PF01535.16|0.00039,PPR|PF01535.16|1e-07,PPR|PF01535.16|0.18,PPR|PF01535.16|0.13,PPR|PF01535.16|63,PPR|PF01535.16|2.1e+03,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|0.71,PPR_2|PF13041.2|2.3e-05,PPR_2|PF13041.2|0.066,PPR_2|PF13041.2|2.1e-08,PPR_2|PF13041.2|0.004,PPR_2|PF13041.2|1.7e-08,PPR_2|PF13041.2|9.2,PPR_2|PF13041.2|1.5e+03,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.17,PPR_1|PF12854.3|3.2e+02,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|4.9e+02,PPR_1|PF12854.3|0.0097,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|1,PPR_1|PF12854.3|6.6e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|37,PPR_3|PF13812.2|50,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|0.077,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|17,PPR_3|PF13812.2|6.2,PPR_3|PF13812.2|2.6e+03 S_Transcript_167050:447-2309(+)
ATGAAGATTTCAACTTCCTTCTTAAATAAAAAAAAAAGAACACACAGCTTGGAGTTGCAACAAACACTGGTTTACTTGCCAATTGCCATCTGGTTTGGTATGTTAAAACAGAGCATCCTTTACCGCCAAAACCGATTTCTATGCCTTCAAGCAGCTCCGACCTTGGCCATCACCGAACCCGAATACCCGATAACCAGCACCATCACCAAATGGAACCTTCAGTTAAGGGAGCTCTCAAAACAAAACCAATTCACAAAGGCACTTCATTTATACCTTCAAATACTCCGATCAAGTGACTCTCCAAATGCTTTCACATTCCCCTTCATCATCAAATCCTGTGCCTCTCTTTCTCACCTTTCTACTGGTCAACAGGTTCATTCCCATGTTATTCGAACTGGGTGTTGCTCAGATACCTTTGTTAGAACGTCTTTGATCTCTTTGTACTGTAAAAGTTATCTGGTTGACAGGGCACGCCAGGTATTCGACGAAAGTCCCCAGCCAATTGAGCAGCGACCCACTGTCTGTTACAACGCTCTGATTTCTGGGTACACAGCGAAGTCCAGGGTTTTTGAAGGGTTGTCGTTGTTTAACATAATGAGGCTAGTGGGTGTTTCTTATGATGCTGTCACCATGCTTGGGCTGCTTCCTGTTTGTAGTGTTCCAATGCATTTGAACCTTGGGATGTCTCTACATGGGTGTAATGTTAGGTGTGGTCTGATTAATGATGTTGCTGTTGGGAATTGTTTGCTTACCATGTACATTCGATGTGGATCGGTTGAGTATGCTCATAGATTGTTTAGTGAGATTCCTGAGAAGGGTTTGATCACTTTGAACGCGATGATTAGTGGCTACGCGCAAAATGGGTTGACTTCCCATGTTTTGGATCTTTATCATGAGATGGGAGCTTCTGGGATTCGTCCTGATGCTGTAACATTGCTCGGGGTTTTATCCTCTTGTGCATACCTTGGTGCTCGTGGTGTTGGTTGTGAGGTAGAAAAGCAAGTGGAGAAGTTGGGGTATGGTTCGAATGTCTTCCTGAAGAATGCACTCATTAATATGCATGCTAGATGTGGTAACTTGGTTAAGGCCCGCGCTATATTTGATGAGATGCCTGATAAAAGCTTGGTGACTTGGACGGCTATCATTGGTGGTTATGGTTTGCATGGACATGGAGAGATTGCTGTGGAGTTGTTTGATGAGATGATTAGGAGTGGAATTCGCCCTGATGGAGCAGTTTTTGTTAGTGTATTGGCTGCTTGTAGTCATGCAGGGCTAACCGATAAAGGTTTAAGTTATTTTTACTCGATGGAGAGGGACTACAGGTTGCAGCCTGAGAGAGAGCATTATGCTTGTATGGTCGATCTTCTAGGCAGGGCTGGTCGCCTTAGGGAAGCTTATGACCTCATCTTGTCAATGCCAATGCAACCTGATGCAGCTGTGTGGGGAGCTCTTTTGGGTGCTTGTAAGATTCATAAAAATGTGGAGCTGGCTGAGTTGGCTTTTGAGAGAATTCTTGAGATTGAACCCACAAATATTGGGTACTATGTCTTGTTATCAAACATTTACTTAGATGCTGAGAACATGGACGGTGTAAGAAACGTCCGAGTGATGATGAGAGGACTGAAACGTAGAAAAGAGCCTGGTTACAGTTATGTTGATCATGAAGGGAGGGTTCATATGTTCTTGGCTGGGGATAGGTCTCATCCTCAAATGAATGAGATCTATGGAATGCTGGGCAGGTTAGAGGACTCAATAGAGGTGCTTGGATTTAGAAAGGGAAATCAAGAGGGTGAAACTGAGATGGCTGCCAGTGGCTGCAGAGTGCATAGCGAAAGGTTGGCAATTGCATTTGGGCTTCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_167050.p1 GENE.S_Transcript_167050~~S_Transcript_167050.p1 ORF type:complete len:621 (+),score=104.19,PPR|PF01535.16|1.9e+03,PPR|PF01535.16|0.045,PPR|PF01535.16|0.00027,PPR|PF01535.16|0.055,PPR|PF01535.16|2e-06,PPR|PF01535.16|0.00039,PPR|PF01535.16|1e-07,PPR|PF01535.16|0.18,PPR|PF01535.16|0.13,PPR|PF01535.16|63,PPR|PF01535.16|2.1e+03,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|0.71,PPR_2|PF13041.2|2.3e-05,PPR_2|PF13041.2|0.066,PPR_2|PF13041.2|2.1e-08,PPR_2|PF13041.2|0.004,PPR_2|PF13041.2|1.7e-08,PPR_2|PF13041.2|9.2,PPR_2|PF13041.2|1.5e+03,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.17,PPR_1|PF12854.3|3.2e+02,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|4.9e+02,PPR_1|PF12854.3|0.0097,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|1,PPR_1|PF12854.3|6.6e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|37,PPR_3|PF13812.2|50,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|0.077,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|17,PPR_3|PF13812.2|6.2,PPR_3|PF13812.2|2.6e+03 S_Transcript_167050:447-2309(+)
MKISTSFLNKKKRTHSLELQQTLVYLPIAIWFGMLKQSILYRQNRFLCLQAAPTLAITEPEYPITSTITKWNLQLRELSKQNQFTKALHLYLQILRSSDSPNAFTFPFIIKSCASLSHLSTGQQVHSHVIRTGCCSDTFVRTSLISLYCKSYLVDRARQVFDESPQPIEQRPTVCYNALISGYTAKSRVFEGLSLFNIMRLVGVSYDAVTMLGLLPVCSVPMHLNLGMSLHGCNVRCGLINDVAVGNCLLTMYIRCGSVEYAHRLFSEIPEKGLITLNAMISGYAQNGLTSHVLDLYHEMGASGIRPDAVTLLGVLSSCAYLGARGVGCEVEKQVEKLGYGSNVFLKNALINMHARCGNLVKARAIFDEMPDKSLVTWTAIIGGYGLHGHGEIAVELFDEMIRSGIRPDGAVFVSVLAACSHAGLTDKGLSYFYSMERDYRLQPEREHYACMVDLLGRAGRLREAYDLILSMPMQPDAAVWGALLGACKIHKNVELAELAFERILEIEPTNIGYYVLLSNIYLDAENMDGVRNVRVMMRGLKRRKEPGYSYVDHEGRVHMFLAGDRSHPQMNEIYGMLGRLEDSIEVLGFRKGNQEGETEMAASGCRVHSERLAIAFGLL*

Click here to download the sequence:
Link to NCBI Protein BLAST