Transcript Information: S_Transcript_167072.p1


Annotated TAIR IDAT5G12360.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4000890-4002248 | Reverse length=194
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7854350511262
Replicate 23.6238398307029
Replicate 33.4747183925624
Condition 2: 8 Hour
Replicate 15.1510604630756
Replicate 26.0522875547087
Replicate 34.2219794773152
Condition 3: 24 Hour
Replicate 13.5880484960396
Replicate 23.9415324480604
Replicate 33.0461406286372


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_167072.p1 GENE.S_Transcript_167072~~S_Transcript_167072.p1 ORF type:complete len:207 (+),score=48.98 S_Transcript_167072:186-806(+)
ATGGCATCATACCAACCCATATTTCGGGTTAATGAGAATGAAATTAGAGCTCCTGCAAAGATGCAACCAAAGGTGAGCAGGAAACCCCTTGGTGACGTGACTAACTCAACCAAGCTGCATTCTAAGGGTAAGCCATCAGCAAAGAATATAGGTGGCTTTAAGGCTCCAGAGAAGGTGAGCAGGAAACCCCTTGGTGACTTGACAAACTCAAATAAGCCTCGTCCGAAAGAGAAGGCCTCCAAGAGTACCTGCAGTGGAGTACAGATCCACACTGATGCAGCAGCAGCAGAAACTTTTTGCCACGACCATCAAAAGTGCATAGTGGTACAGCGACAATCAATGAGCATGGATTATTTTCTGGAAACTGTTGCACTTCAGAAAGAAGCTACTGCATCAGTGTCCACTCCTCAGCTCCCTGGAAAATCCATACCCTATAAACTAAAGCTTGAGACTCCTATGAAGTATGCAGGTGACAAAATAGAGTTTGATATTTGGGATATCTGTGGTGGAACCCCAACGCCAAAGTCTCCAGTTTGGAATATGAACTCAAAGGATTTGGAGTTTTCTGGTTTCAAGCTTAAGGAGGAATTTTCTGGTTTCAAGCTGATGAAGACACCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_167072.p1 GENE.S_Transcript_167072~~S_Transcript_167072.p1 ORF type:complete len:207 (+),score=48.98 S_Transcript_167072:186-806(+)
MASYQPIFRVNENEIRAPAKMQPKVSRKPLGDVTNSTKLHSKGKPSAKNIGGFKAPEKVSRKPLGDLTNSNKPRPKEKASKSTCSGVQIHTDAAAAETFCHDHQKCIVVQRQSMSMDYFLETVALQKEATASVSTPQLPGKSIPYKLKLETPMKYAGDKIEFDIWDICGGTPTPKSPVWNMNSKDLEFSGFKLKEEFSGFKLMKTP*

Click here to download the sequence:
Link to NCBI Protein BLAST