Transcript Information: S_Transcript_1671.p1


Annotated TAIR IDAT1G62020.1
Annotated Gene NameCoatomer, alpha subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22919814-22923728 | Forward length=1216
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.175853784937
Replicate 236.596358068331
Replicate 337.460389288757
Condition 2: 8 Hour
Replicate 138.697098754305
Replicate 238.724036611832
Replicate 339.484154136217
Condition 3: 24 Hour
Replicate 138.044862715776
Replicate 233.447249405947
Replicate 334.760487777354


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_1671.p1 GENE.S_Transcript_1671~~S_Transcript_1671.p1 ORF type:complete len:1219 (+),score=286.57,COPI_C|PF06957.7|4.2e-168,Coatomer_WDAD|PF04053.10|2.4e-131,WD40|PF00400.28|8.8e+02,WD40|PF00400.28|0.0014,WD40|PF00400.28|2.8e-06,WD40|PF00400.28|5.6e-06,WD40|PF00400.28|0.0041,WD40|PF00400.28|0.00062,WD40|PF00400.28|1.7e+03 S_Transcript_1671:499-4155(+)
ATGTTGACAAAATTTGAGACAAAGAGTAACAAAGTCAAAGGATTGAGTTTCCACAGTAAGAGACCATGGATCCTTGCCAGTCTTCACAGTGGAGTGATCCAGCTTTGGGACTACAGGATGGGAACTCTTATCGATCGCTTCGACGAACACGATGGTCCTGTTCGTGGCGTTCACTTTCATAACTCTCAGCCATTGTTCGTTTCCGGAGGTGATGACTACAAGATCAAAGTTTGGAACTACAAATTGCATAGGTGTCTGTTTACCCTACTTGGACACCTTGATTACATTCGTACAGTGCAGTTCCACCATGAGAATCCATGGATCGTCAGTGCCAGTGATGACCAGACTATCCGCATATGGAACTGGCAGTCTAGGACATGTATCTCTGTCTTGACGGGCCACAATCATTATGTGATGTGTGCCTCATTTCACCCGAAAGAAGATCTCGTTGTGTCTGCATCTCTTGATCAAACAGTTCGGGTCTGGGACATTGGATCGCTAAGAAAGAAGTCTGTATCTCCTGCAGATGACTTATTGCGGTTGAGTCAGATGAATTCTGATCTTTTTGGGGGTGTTGATGCTGTGGTGAAGTATGTCTTGGAAGGCCACGATAGGGGGGTCAACTGGGCTGCTTTCCATCCTACTCTGCCATTGATTGTGTCTGGAGCTGATGACCGTCAAGTAAAGTTGTGGCGTATGAATGATACCAAGGCCTGGGAAGTGGACACATTGAGGGGACATATGAATAATGTTTCCTGTGTTATGTTCCATATCAAGCAGGACATTATAGTTTCAAATTCAGAGGACAAAAGTATTCGCGTCTGGGATGTGACGAAGCGTACCGGTATCCAAACTTTTCGTAGGGAGCATGATAGATTTTGGATTCTTGCAGCTCATCCTGAGATGAATCTTCTAGCTGCTGGTCATGATAGTGGGATGATTGTGTTCAAATTGGAGAGAGAACGACCCGCATTTTCTGTTAGTGGTGATACAATGTTCTATGCAAAAGATCGTTTCTTGCGGTTCTTTGAGTTTTCAACCCAGCGAGATACACAGGTAATCCCAATTCGACGGCCTGGCTCCACAACCTTGAATCAGGGCCCTCGGACACTTTCTTATAGTCCAACAGAGAATGCTGTCCTCATTTGTTCTGATGTTGATGGTGGATCGTATGAGCTGTATGTTGTGCCCAAAGATGCCTTTGGTAGGGGTGATGTTGCTCAAGAGGCAAAAAGAGGTGTCGGAGGATCTGCTATTTTTATTGCTCGCAACAGGTTTGCAGTTCTTGACAAAAGCAGCAACCAAATATTAGTCAAGAACCTGAAAAATGAGATTGTGAAGAAGAGCACACTCCCTATTGCCACTGATGCAATATTCTATGCTGGTACTGGTAATCTGCTATGTAGGGCAGAGGATAGAGTGGTAATTTTTGATCTTCAACAAAGGATTGTTATAGGAGAACTTCAGACACCTTTTGTCAAGTATGTTGTGTGGTCAAATGACATGGAGAGTGTTGCCTTGCTGAGCAAACATGCTATTGTGATTGCAAGTAAGAAACTTGTGCATCAGTGCACTCTTCATGAGACGATTCGTGTCAAGAGTGGAGCCTGGGATGATAATGGAGTCTTCATCTATACAACTTTGAATCACATTAAGTATTGTCTTCCCAATGGTGACAGTGGCATAATTAGAACACTTGATGTTCCAATCTACATCACAAAAGTCTCTGGTAACACTATCTTTTGCTTGGATCGGGATGGAAAGAACAAGGCCATAGTTATTGACGCAACAGAGTATATCTTCAAGCTCTCTCTGATGAGGAAGAGGTATGACCATGTCATGAGCATGATAAGGAGCTCTCAACTTGTGGGGCAGTCAGTGATAGCTTATTTACAGCAGAAAGGATTCCCTGATGTAGCTTTACATCTTGTGAAAGATGAGAGGACTCGTTTCAACTTGGCCCTGGAGAGTGGCAACATCCAAATTGCCGTAGCTTCAGCTAAGGAACTTGATGAGAAAGATCACTGGTATAGATTAGGGCTAGAGGCTCTTCGCCAGGGTAATACTGGTATTGTAGAGTATGCATACCAGAGGACGAAAAATTTTGAGAGGCTGTCTTTTCTGTATCTGATTACAGGGAATATGGAGAAGTTGAGCAAAATGTTGAAGATTGCGGAGGTCAAGAACAACGTTATGGGTCAGTTCCATAATGCCCTTTATTTAGGTGATATCCAGGAGCGTGTGACGATTTTGAAGAATGCTGGCCATTTGCCACTGGCTTACATCACCGCTTCAGTTCATGGGCTGCATGATGTTGCTGAGAGCCTAGCAGCTGAGCTGGGAGATGATGTTCCCACTCTGCCTGAAGGAAAAGTACCATCCCTTCTGATGCCGCCTCCACCTGTTATTTGTGGTGGAGATTGGCCCTTGTTGAGAGTGATGGGCGGGATCTTTGCCAGTGGACTTGATAGTGTGGGCAGGGGTGGTGCTGAGGATGAAGAGGAGGTTGGTGAAGGTGACTGGGGTGAAGAACTGGATATGCATGATGTTGAGAATATAGAAAATGGAGACTTTGCTGAAGTTTTAGCAGATGGAGAAGTGGATGAAGAGAATGAAGAAGAGGGAGGATGGGATCTTGAGGATTTAGATCTACCCCCTGAAGAAGATACTCCAAAAGCTTCTGTTAGTTCTCGTTCATCCGTTTTTGTGGCTCCAACTCCTGGTATGCCTGTCAGCCAAATCTGGATCCAGAGGTCTTCTCTTGCTGCTGAGCATGCAGCCGCTGGAAATTTCGATACTGCAATGCGGCTGCTAAATCGTCAACTTGGGATCAAAAATTTTGCTCCTTTGAAACCCATGTTCCTTGACCTTCATTCTGGAAGCCACTCTTATGTACGTGCATTTTCTTCTGCTCCTGTGATTTCCGTGGCTGTTGAAAGGGGATGGAATGAGTCATCTAGCCCTAATGTGAGAGGCCCTCCAGCTCTTGTGTTTAGTTTCTTCCAACTGGAAGAGAAGCTGAAGCTCGGTTACAGGTCCACAACAGCTGGTAAAATTTCCGATGCTCTCCGAACTTTTCTCAGTATTCTACATACCATTCCTCTGATAGTTGTTGAGTCGAGAAGAGAAGTTGATGAAGTCAAAGAGCTTATCATCATCGTGAAGGAATATGTTTTGGGTCTTAAGCTGGAGACTAAGAGAAGAGAACTGAAAGATGATCCAGTGCGCCAACAGGAACTTGCAGCTTATTTCACTCACTGCAAACTTCAAACTCCTCATTTGAGGCTTGCCCTGCAAAATGCCATGACTGTTTGTTACAAGGCAAAGAATCTCAGCACAGCTTCCAACTTTGCCAGACGGCTCCTGGAGACTAACCCCCCTAATGAGCAACAAGCAAAAATGGCCCGACAAGTTGTACAGGCTGCTGAGAAAAACATGACTGATGCAGCTGAATTGAACTATGATTTTAGAAATCCATTTGTAGTCTGTGGGGCTACATATGTGCCAATTTACCGTGGTCAGAAAGACGTCTCGTGCCCCTATTGTGGTGCTCGTTTTGTTCCCAGCCAGGAGGGGCAGCTATGTAATGTTTGTGAGCTTGCTGTGATCGGAGCCGATGCTTCGGGTTTGCTTTGTTCTCCAACTCAGATCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_1671.p1 GENE.S_Transcript_1671~~S_Transcript_1671.p1 ORF type:complete len:1219 (+),score=286.57,COPI_C|PF06957.7|4.2e-168,Coatomer_WDAD|PF04053.10|2.4e-131,WD40|PF00400.28|8.8e+02,WD40|PF00400.28|0.0014,WD40|PF00400.28|2.8e-06,WD40|PF00400.28|5.6e-06,WD40|PF00400.28|0.0041,WD40|PF00400.28|0.00062,WD40|PF00400.28|1.7e+03 S_Transcript_1671:499-4155(+)
MLTKFETKSNKVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLRKKSVSPADDLLRLSQMNSDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHIKQDIIVSNSEDKSIRVWDVTKRTGIQTFRREHDRFWILAAHPEMNLLAAGHDSGMIVFKLERERPAFSVSGDTMFYAKDRFLRFFEFSTQRDTQVIPIRRPGSTTLNQGPRTLSYSPTENAVLICSDVDGGSYELYVVPKDAFGRGDVAQEAKRGVGGSAIFIARNRFAVLDKSSNQILVKNLKNEIVKKSTLPIATDAIFYAGTGNLLCRAEDRVVIFDLQQRIVIGELQTPFVKYVVWSNDMESVALLSKHAIVIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNKAIVIDATEYIFKLSLMRKRYDHVMSMIRSSQLVGQSVIAYLQQKGFPDVALHLVKDERTRFNLALESGNIQIAVASAKELDEKDHWYRLGLEALRQGNTGIVEYAYQRTKNFERLSFLYLITGNMEKLSKMLKIAEVKNNVMGQFHNALYLGDIQERVTILKNAGHLPLAYITASVHGLHDVAESLAAELGDDVPTLPEGKVPSLLMPPPPVICGGDWPLLRVMGGIFASGLDSVGRGGAEDEEEVGEGDWGEELDMHDVENIENGDFAEVLADGEVDEENEEEGGWDLEDLDLPPEEDTPKASVSSRSSVFVAPTPGMPVSQIWIQRSSLAAEHAAAGNFDTAMRLLNRQLGIKNFAPLKPMFLDLHSGSHSYVRAFSSAPVISVAVERGWNESSSPNVRGPPALVFSFFQLEEKLKLGYRSTTAGKISDALRTFLSILHTIPLIVVESRREVDEVKELIIIVKEYVLGLKLETKRRELKDDPVRQQELAAYFTHCKLQTPHLRLALQNAMTVCYKAKNLSTASNFARRLLETNPPNEQQAKMARQVVQAAEKNMTDAAELNYDFRNPFVVCGATYVPIYRGQKDVSCPYCGARFVPSQEGQLCNVCELAVIGADASGLLCSPTQIR*

Click here to download the sequence:
Link to NCBI Protein BLAST