Transcript Information: S_Transcript_167128.p1


Annotated TAIR IDAT3G22630.1
Annotated Gene Name20S proteasome beta subunit D1
Annotated Gene Symbol(s)PBD1, PRCGB
Annotation TypeOrtholog
Chromosome Positionchr3:8009709-8010774 | Reverse length=204
E-Value5.8E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.594889152054
Replicate 228.130056685831
Replicate 330.891582940031
Condition 2: 8 Hour
Replicate 129.855546443986
Replicate 229.922347555634
Replicate 332.240219502534
Condition 3: 24 Hour
Replicate 124.575493926918
Replicate 228.04646682573
Replicate 326.798422180436


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_167128.p1 GENE.S_Transcript_167128~~S_Transcript_167128.p1 ORF type:5prime_partial len:80 (+),score=17.04,Proteasome|PF00227.22|5.3e-09 S_Transcript_167128:2-241(+)
GACAAGGGAGCATTTGGTTATGCTGCCTATTTTGCCATGTCCATGATGGACAGACACTACCACAGTGGGATGTCACTTGAAGAAGCTATTGAGTTGGTCGACAAGTGCATACTCGAGATCAGATCCAGATTGGTTGTGGCCCCACCAAATTTTGTGATCAAAATTGTCGACAAGGATGGAGCACGAGAGTATGCCTGGCGTGAGTCGGTTAAAGATGCAGGTGCCGTTGCTTCTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_167128.p1 GENE.S_Transcript_167128~~S_Transcript_167128.p1 ORF type:5prime_partial len:80 (+),score=17.04,Proteasome|PF00227.22|5.3e-09 S_Transcript_167128:2-241(+)
DKGAFGYAAYFAMSMMDRHYHSGMSLEEAIELVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDAGAVASA*

Click here to download the sequence:
Link to NCBI Protein BLAST