Transcript Information: S_Transcript_167129.p1


Annotated TAIR IDAT3G22630.1
Annotated Gene Name20S proteasome beta subunit D1
Annotated Gene Symbol(s)PBD1, PRCGB
Annotation TypeOrtholog
Chromosome Positionchr3:8009709-8010774 | Reverse length=204
E-Value6.8E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6546345480262
Replicate 213.094175916249
Replicate 34.3482873693042
Condition 2: 8 Hour
Replicate 113.350041092839
Replicate 210.913096897428
Replicate 37.4518816830423
Condition 3: 24 Hour
Replicate 19.2352352968366
Replicate 211.239776472823
Replicate 36.3567754191756


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_167129.p1 GENE.S_Transcript_167129~~S_Transcript_167129.p1 ORF type:complete len:123 (+),score=21.08,Proteasome|PF00227.22|4.8e-20 S_Transcript_167129:924-1292(+)
ATGTTAATAATGCTTTTCCTTTCAACTGTGCAGAACCCATACTTTGTAAACATACTTATGGCTGGGTACGATAAAGAGAATGGCCCGTCAATGTACTTTGTTGACTACATTGCTACTCTTCACAAGGTAGACAAGGGAGCATTTGGGTATGGTGCCTATTTTGCCTTGTCCATGATGGATAGACACTACCACAGTGGGATGTCACTTGAAGAAGCTATCGAGCTGGTCGACAAGTGCATACTTGAGATCAGGTCCAGATTGGTTGTGGCGCCACCAAATTTTGTGATCAAAATTGTCGACAAGGATGGAGCACGAGAGTATGCCTGGCGTGAGTCGGTTGAAGATGCAGGTGTAGTTGCTTCTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_167129.p1 GENE.S_Transcript_167129~~S_Transcript_167129.p1 ORF type:complete len:123 (+),score=21.08,Proteasome|PF00227.22|4.8e-20 S_Transcript_167129:924-1292(+)
MLIMLFLSTVQNPYFVNILMAGYDKENGPSMYFVDYIATLHKVDKGAFGYGAYFALSMMDRHYHSGMSLEEAIELVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVEDAGVVASA*

Click here to download the sequence:
Link to NCBI Protein BLAST