Transcript Information: S_Transcript_167137.p1


Annotated TAIR IDAT3G22630.1
Annotated Gene Name20S proteasome beta subunit D1
Annotated Gene Symbol(s)PBD1, PRCGB
Annotation TypeOrtholog
Chromosome Positionchr3:8009709-8010774 | Reverse length=204
E-Value2.2E-126
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.875239714252
Replicate 224.131176078532
Replicate 329.032900944106
Condition 2: 8 Hour
Replicate 136.153200772015
Replicate 233.295602858343
Replicate 334.888047447216
Condition 3: 24 Hour
Replicate 124.575493926918
Replicate 228.241233956464
Replicate 326.108756903734


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_167137.p1 GENE.S_Transcript_167137~~S_Transcript_167137.p1 ORF type:5prime_partial len:256 (+),score=45.45,Proteasome|PF00227.22|1.2e-38 S_Transcript_167137:2-769(+)
GATCTGGGGGGCAAACTTGTTGTTCAAGAAGCAGAAGAAAAACTCCCAATAAAAGCAAGCGCGACTCCATCGAGACCCCCCGTACCAAACCCCCAAATCAAAAACCTAAACATCAAGACAGAGAGAGAGAGACTAAAGAAAGAAGAAAGGATGGAGTGTGTATTTGGATTAGTAGGCAACGGTTTTGCATTGATAGCAGCAGACACATCTGCAGTTCACAGCATTCTTGTCCACAAATCCAATGAAGACAAGGTTATGATCCTCGATTCCCACAAACTTCTGGGTGCCAGTGGTGAATCTGGTGACAGAGTTCAATTCACTGAGTACATCCAAAAGAACGTTGCTTTGTACCAATTTAGAAATGGGATTCCTTTGACTACTTCTGCTGCTGCAAATTTCACTCGTGGAGAACTCGCCACTGCCTTGCGCAAGAACCCATACTTTGTAAACATACTTATGGCTGGGTACGATAAAGAGAATGGCCCGTCAATGTACTTTGTTGACTACATTGCTACTCTTCACAAGGTAGACAAGGGAGCATTTGGGTATGGTGCCTATTTTGCCTTGTCCATGATGGATAGACACTACCACAGTGGGATGTCACTTGAAGAAGCTATCGAGCTGGTCGACAAGTGCATACTTGAGATCAGGTCCAGATTGGTTGTGGCGCCACCAAATTTTGTGATCAAAATTGTCGACAAGGATGGAGCACGAGAGTATGCCTGGCGTGAGTCGGTTGAAGATGCAGGTGTAGTTGCTTCTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_167137.p1 GENE.S_Transcript_167137~~S_Transcript_167137.p1 ORF type:5prime_partial len:256 (+),score=45.45,Proteasome|PF00227.22|1.2e-38 S_Transcript_167137:2-769(+)
DLGGKLVVQEAEEKLPIKASATPSRPPVPNPQIKNLNIKTERERLKKEERMECVFGLVGNGFALIAADTSAVHSILVHKSNEDKVMILDSHKLLGASGESGDRVQFTEYIQKNVALYQFRNGIPLTTSAAANFTRGELATALRKNPYFVNILMAGYDKENGPSMYFVDYIATLHKVDKGAFGYGAYFALSMMDRHYHSGMSLEEAIELVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVEDAGVVASA*

Click here to download the sequence:
Link to NCBI Protein BLAST