Transcript Information: S_Transcript_167305.p1


Annotated TAIR IDAT1G53440.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19945959-19951562 | Forward length=1035
E-Value4E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60484093716319
Replicate 20.37607027654855
Replicate 30.52394136601138
Condition 2: 8 Hour
Replicate 10.84816893306779
Replicate 20.63556388181042
Replicate 30.2422255409657
Condition 3: 24 Hour
Replicate 10.62059328098279
Replicate 20.64385828341896
Replicate 31.4330707048361


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_167305.p1 GENE.S_Transcript_167305~~S_Transcript_167305.p1 ORF type:3prime_partial len:176 (+),score=11.93,LRR_8|PF13855.2|9.5e-07,LRR_8|PF13855.2|78,LRR_8|PF13855.2|2.7e-10,LRR_4|PF12799.3|8.4e-05,LRR_4|PF12799.3|27,LRR_4|PF12799.3|0.077,LRR_4|PF12799.3|0.0064,LRR_4|PF12799.3|0.0068,LRR_1|PF00560.29|0.13,LRR_1|PF00560.29|82,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|5.4e+03,LRR_1|PF00560.29|3.2,LRR_1|PF00560.29|0.19,LRR_1|PF00560.29|2.3e+02 S_Transcript_167305:280-804(+)
ATGGGCAGTCTGAATAGTTTGAAAACATTGGTGCTTTCTGGAAACAACATTACTGGAACAATACCTGAAACATTTGTCAATTTAAAAAACCTCACAGAACTGAGGATGAATGGAATCAACTTATCTGGGAAGATACCTAATTTTATTGGTAGTTGGACCAAGCTTAGTATATTGGAAATGCAAGGCACATCTATGGAGGGACCTATTCCATCTAGCTTATCTCTATTGACATGCTTGAAAACTCTGAGAATATCAGATCTCAATACGACAAGTATCCATTTCCCCAATGTTTCGAGCATGAATGAACTACAGTATTTGGTGCTGCGGAATTGCTTCATTACTGATCAGATCCCTGAATATATCAGAACCTTAGAGAGCTTAAAGCTTATAGATCTAAGCTATAACCAGTTAAGCGGTCCCATTCCAGATTCAATAGGATCCTTGCACGATCTTGTATATTTGTTCCTGTCAAACAACTTACTTTCTGGTGCGTTACCAGTTTGGATATCGAAAGGCACACATCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_167305.p1 GENE.S_Transcript_167305~~S_Transcript_167305.p1 ORF type:3prime_partial len:176 (+),score=11.93,LRR_8|PF13855.2|9.5e-07,LRR_8|PF13855.2|78,LRR_8|PF13855.2|2.7e-10,LRR_4|PF12799.3|8.4e-05,LRR_4|PF12799.3|27,LRR_4|PF12799.3|0.077,LRR_4|PF12799.3|0.0064,LRR_4|PF12799.3|0.0068,LRR_1|PF00560.29|0.13,LRR_1|PF00560.29|82,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|5.4e+03,LRR_1|PF00560.29|3.2,LRR_1|PF00560.29|0.19,LRR_1|PF00560.29|2.3e+02 S_Transcript_167305:280-804(+)
MGSLNSLKTLVLSGNNITGTIPETFVNLKNLTELRMNGINLSGKIPNFIGSWTKLSILEMQGTSMEGPIPSSLSLLTCLKTLRISDLNTTSIHFPNVSSMNELQYLVLRNCFITDQIPEYIRTLESLKLIDLSYNQLSGPIPDSIGSLHDLVYLFLSNNLLSGALPVWISKGTHH

Click here to download the sequence:
Link to NCBI Protein BLAST