Transcript Information: S_Transcript_167383.p2


Annotated TAIR IDAT1G19150.1
Annotated Gene Namephotosystem I light harvesting complex gene 6
Annotated Gene Symbol(s)LHCA6, LHCA2*1
Annotation TypeOrtholog
Chromosome Positionchr1:6612806-6613799 | Forward length=270
E-Value2.1E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45884484888242
Replicate 20.38039292340543
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.78151074401198
Replicate 30.21743141728548


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_167383.p2 GENE.S_Transcript_167383~~S_Transcript_167383.p2 ORF type:3prime_partial len:116 (+),score=-12.31,Chloroa_b-bind|PF00504.17|4.7e-19 S_Transcript_167383:48-347(+)
ATGGCGACCACGATGAAGACCGTCCCTGTTGCCGCTCGCCCAGTCTGCGCAGCACGAGGGGCCGTGGCGGCGCATGCGGCATCACGCCCACTGTGGCTACCGGGCAGTCAGCCACCCAAGCAGCTGGATGGCAGCTTGCCAGGCGACTACGGCTTCGACCCCCTCAACCTTGGCGCAGAACCCAAGAACTTGAAATGGTACCAGGCGTCGGAGGTTTTCCACGGCCGGCTCGCGATGGCGGCGGTCGCGGGCATCCTCATCCCCGGCGCCATCATCCCGGGCTTCGCGCAGTGGTTGGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_167383.p2 GENE.S_Transcript_167383~~S_Transcript_167383.p2 ORF type:3prime_partial len:116 (+),score=-12.31,Chloroa_b-bind|PF00504.17|4.7e-19 S_Transcript_167383:48-347(+)
MATTMKTVPVAARPVCAARGAVAAHAASRPLWLPGSQPPKQLDGSLPGDYGFDPLNLGAEPKNLKWYQASEVFHGRLAMAAVAGILIPGAIIPGFAQWLD

Click here to download the sequence:
Link to NCBI Protein BLAST