Transcript Information: S_Transcript_167385.p2


Annotated TAIR IDAT3G08940.2
Annotated Gene Namelight harvesting complex photosystem II
Annotated Gene Symbol(s)LHCB4.2
Annotation TypeOrtholog
Chromosome Positionchr3:2717717-2718665 | Forward length=287
E-Value6.2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.80996090715767
Replicate 23.1655306756434
Replicate 30.88204389965046
Condition 2: 8 Hour
Replicate 10.092719088335361
Replicate 20
Replicate 30.46338799141264
Condition 3: 24 Hour
Replicate 10
Replicate 23.1532259584483
Replicate 30.87728850104752


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_167385.p2 GENE.S_Transcript_167385~~S_Transcript_167385.p2 ORF type:3prime_partial len:230 (+),score=-37.96,Chloroa_b-bind|PF00504.17|2.7e-46 S_Transcript_167385:58-744(+)
ATGACTTGCGCAGCATTCTCCTCCAAGGGCCTGCGGCTGGCACCGCTCCAGGGCGTTAAGGGCCGCGCCGGCGCCCGCGCCACCGTCGCGCGCGCCGCCGACCGCCCCGTCTGGTTCCCAGGCAACGCGCCGCCAGAGTGGCTCGACGGCAGCCTCGCGGGCGACTACGGCTTCGACCCCCTCGGCCTCGGCTCCGACGAGCGCGCGCTGCAGTACTTTGTGCAAGCGGAGCTCGTGCACGCGCGCTTCGCGATGCTCGGCGCCGCGGGCATCGTCATCCCGGGCCTGCTGACCAAGATGGGCGTGCTGAGCGTGCCGGACTGGTGGGACGCGGGCAAGATCAGCATCCAGCAGAGCGGCATCCCGCTCGGCGCCCTCCTCGTCGTGCAGCTCATCCTCATGGGCTGGGTCGAGGGCAAGCGCATCCAAGACTTCAAGAACCCCGGCTCGCAGGGCGACGGCACGTTCCTCGGCGTCACCGACGGCTTCAAGGGCAAGGAGAACGGCTACCCCGGCGGCTTCTTCGACCCCGCGGGCATGGCGAGCCCGCAGATGAAGCAGAAGGAGATCAAGAACGGGCGGCTCGCGATGCTCGCGTGCGTCGGCTTCTTCGCGCAGCACGTCGCGACGGGCAAGGGCCCGATGGACAACCTCTTCGAGCACATGGCGGACCCCGGCAACGTCAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_167385.p2 GENE.S_Transcript_167385~~S_Transcript_167385.p2 ORF type:3prime_partial len:230 (+),score=-37.96,Chloroa_b-bind|PF00504.17|2.7e-46 S_Transcript_167385:58-744(+)
MTCAAFSSKGLRLAPLQGVKGRAGARATVARAADRPVWFPGNAPPEWLDGSLAGDYGFDPLGLGSDERALQYFVQAELVHARFAMLGAAGIVIPGLLTKMGVLSVPDWWDAGKISIQQSGIPLGALLVVQLILMGWVEGKRIQDFKNPGSQGDGTFLGVTDGFKGKENGYPGGFFDPAGMASPQMKQKEIKNGRLAMLACVGFFAQHVATGKGPMDNLFEHMADPGNVN

Click here to download the sequence:
Link to NCBI Protein BLAST