Transcript Information: S_Transcript_167389.p2


Annotated TAIR IDAT3G61470.1
Annotated Gene Namephotosystem I light harvesting complex gene 2
Annotated Gene Symbol(s)LHCA2
Annotation TypeHomolog
Chromosome Positionchr3:22745736-22747032 | Forward length=257
E-Value2E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23141740204505
Replicate 20.86332654790275
Replicate 30.2405574271774
Condition 2: 8 Hour
Replicate 10.092719088335361
Replicate 20
Replicate 30.27803279484758
Condition 3: 24 Hour
Replicate 10.094977754306931
Replicate 21.2809980456196
Replicate 30.21932212526188


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_167389.p2 GENE.S_Transcript_167389~~S_Transcript_167389.p2 ORF type:3prime_partial len:230 (+),score=-38.19,Chloroa_b-bind|PF00504.17|2.5e-45 S_Transcript_167389:58-744(+)
ATGACTTGCGCAGCATTCTCCTCCAAGGGCCTGCGGCTGGCACCGCTCCAGGGCGTTAAGGGCCGCGCCGGCGCCCGCGCCACCGTCGCGCGCGCCGCCGACCGCCCCGTCTGGTTCCCAGGCAACGCGCCGCCAGAGTGGCTCGACGGCAGCCTCGCGGGCGACTACGGCTTCGACCCCCTCGGCCTCGGCTCCGACGAGCGCGCGCTGCAGTACTTTGTGCAAGCGGAGCTCGTGCACGCGCGCTTCGCGATGCTCGGCGTCGCCGGCATCGTGCTCCCGGGCCTCGCGACGAAGGCCGGCGCGCTCAACGTGCCCGACTGGTGGGTCGCCGGCGAGCAGAGCATCAAGGCGAGCGGCATCCCGCTCGGCGCGCTGCTCACCGTGCAGCTGCTCCTCATGGGCTGGGTCGAGGGCAAGCGCATCCAAGACTTCAAGAACCCCGGCTCGCAGGGCGACGGCACGTTCCTCGGCGTCACCGACGGCTTCAAGGGCAAGGAGAACGGCTACCCCGGCGGCTTCTTCGACCCCGCGGGCATGGCGAGCCCGCAGATGAAGCAGAAGGAGATCAAGAACGGGCGGCTCGCGATGCTCGCGTGCGTCGGCTTCTTCGCGCAGCACGTCGCGACGGGCAAGGGCCCGATGGACAACCTCTTCGAGCACATGGCGGACCCCGGCAACGTCAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_167389.p2 GENE.S_Transcript_167389~~S_Transcript_167389.p2 ORF type:3prime_partial len:230 (+),score=-38.19,Chloroa_b-bind|PF00504.17|2.5e-45 S_Transcript_167389:58-744(+)
MTCAAFSSKGLRLAPLQGVKGRAGARATVARAADRPVWFPGNAPPEWLDGSLAGDYGFDPLGLGSDERALQYFVQAELVHARFAMLGVAGIVLPGLATKAGALNVPDWWVAGEQSIKASGIPLGALLTVQLLLMGWVEGKRIQDFKNPGSQGDGTFLGVTDGFKGKENGYPGGFFDPAGMASPQMKQKEIKNGRLAMLACVGFFAQHVATGKGPMDNLFEHMADPGNVN

Click here to download the sequence:
Link to NCBI Protein BLAST