Transcript Information: S_Transcript_167422.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6031928454928
Replicate 21.329083708284
Replicate 31.222109017588
Condition 2: 8 Hour
Replicate 12.1839255144052
Replicate 21.3477017252847
Replicate 33.0818092922865
Condition 3: 24 Hour
Replicate 12.8951050409221
Replicate 21.5018188393965
Replicate 30.75970013268422


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_167422.p1 GENE.S_Transcript_167422~~S_Transcript_167422.p1 ORF type:internal len:166 (+),score=19.88,RVT_1|PF00078.23|3.1e-16 S_Transcript_167422:1-495(+)
GATTGGTTTTCTTCTTCCCGGGGTTTGAGGCAGGGGGATCCTCTATCTCCCTTTCTTTTTACCCTGGTGGTGGACGTCTTGAGTCGTATGATAGACAGGGGGGTGGAGGTAGGGGAAGTGGAGTGTTTTAGGGTCGGGAGGGAAGGTGTTCCTGTTTCCCACCTCCAGTTTGCGGATGATACGATCCTTTTCCTCTCTGCGAGTCATGAGGTGCTCCGCAAGGTTCTTACTCTTTTGGAGGTTTTCGAGTTGGTCTCAGGACTGCGGGTTAATCTTTCTAAGTGTGGTCTAGCCGGTATTAATGTGGGTGAGGGTTTCTTGGGGTCTCTTGCTAGAGAGACGGGCTGTGTGGTTCAACATTGGCCCATCACCTATCTAGGCCTCCCCTTGGGGGGTAATCCTAGGGCAGTTTCTTTTTGGGATCCCGTGGTGTCTAGAGTTGCTAAGCGGCTAGATGGTTGGAAGGGTAGATACTTTTCGCTAGGTGGTCGCATA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_167422.p1 GENE.S_Transcript_167422~~S_Transcript_167422.p1 ORF type:internal len:166 (+),score=19.88,RVT_1|PF00078.23|3.1e-16 S_Transcript_167422:1-495(+)
DWFSSSRGLRQGDPLSPFLFTLVVDVLSRMIDRGVEVGEVECFRVGREGVPVSHLQFADDTILFLSASHEVLRKVLTLLEVFELVSGLRVNLSKCGLAGINVGEGFLGSLARETGCVVQHWPITYLGLPLGGNPRAVSFWDPVVSRVAKRLDGWKGRYFSLGGRI

Click here to download the sequence:
Link to NCBI Protein BLAST