Transcript Information: S_Transcript_167521.p1


Annotated TAIR IDAT1G10930.1
Annotated Gene NameDNA helicase (RECQl4A)
Annotated Gene Symbol(s)ATSGS1, RECQ4A, ATRECQ4A
Annotation TypeOrtholog
Chromosome Positionchr1:3648032-3654997 | Reverse length=1188
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9866965647263
Replicate 21.9728007069476
Replicate 31.4524222018258
Condition 2: 8 Hour
Replicate 11.9418526047594
Replicate 21.9453781425849
Replicate 32.8677596449688
Condition 3: 24 Hour
Replicate 10.698892909051
Replicate 21.5989235402509
Replicate 31.2000644589801


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_167521.p1 GENE.S_Transcript_167521~~S_Transcript_167521.p1 ORF type:complete len:1219 (+),score=257.58,RQC|PF09382.6|1e+03,RQC|PF09382.6|1.5e+03,RQC|PF09382.6|2.1e-22,DEAD|PF00270.25|6.4e-19,Helicase_C|PF00271.27|1.4e+02,Helicase_C|PF00271.27|6.5e-17,HRDC|PF00570.19|5e-15,RecQ_Zn_bind|PF16124.1|2.4e-14 S_Transcript_167521:302-3958(+)
ATGAGCGGAAGAAATATGGTTGCTGGTGTGTCAAAACCTAATCAGAAGCTTCCTAAAGTTAACTTGTTGGAGCATGTCCAGTCACTTAATAAAAGTTCGTCTCAAGGAAATAAGTCTCTATCCTCGAATTTTCTGTTCTCTTTGCCCTCACAAAAGTCACATTCTGAAGGTGTAAGGATGATGGGCTGTCAAGTCCAGAGTATTGCAAGGTCAAACTTAGACCAGGCCTGGCAAGCTCTTTCAAGCCTTCAGCTTGGTTGCAGGAACTATGTGAGACCAGGGAAAACCTTACCACCAGTTAAAGATGCAAATGCCTTTCAATATACTGGAACACGCGTGACTTTAGAGGCTTCTTATGATAACAAAGCCAAATATATTGAAAACCAACAGGAGAAGCATAAACTCAGTGAAAGCAATGGTAGATGTGGCGACTCTGTGAGGTTCCCCTCCACTGTGGTTCAAACATATAGGGTGCCTGAAGTAGGAAAACCTTACAATGGTGAAAGCAACAGAGAAGTGTCAGTGTCAGACAGTTCTCATCCCCAAGCTGTGGAAGGTTTATGCAATAAGGATGCTGTGTTTGCAAGAGATTTCAAGGGGCCAGATGAGGCAGTTTTCGATGACATAAACGATGATGACATTCTAGGGAACATTGACGTTGACCAAATAGTCATGGAGCACTACCAATCAAGTGGAACACCTCAACCTACTACTAGTTCTAAACCTATACCAGTAATATCAGATGTAGATACAAATGTTAGACCTGACAACACTGACATCCCAGCAGAACTCTGCTCTACCTGCAATCATGGATGTAAGTTAGGACTATGTCCAGAAGCTGCAAATCATCTGCAAGAGATGAAAGACATGTTAATTGCAATTTCAAATGAACTTCTTGACAATATGGATCTAAATCCTGAAAGGATGGAGGAACTCCGGCAGGACAGGTTGCGGCTAAATAAGCAAATGCAGCTGCTTGAGACTCATATCAAGTCTTCGGCTATGGATATTGAGAGGCAGAGTTCACAATTTTCAGCATCAACAGCCAATACTCATTTTCAGTATCAGACTCCTCAGGCAGTCTTTAAAACGATGAATGGATATGATACTCCTGAGGCAGTCTTTAAAACGATGAATGGATATGATACTCCTCAGGCAGCTGGCTGTAGAACAGTTCCAATGAGTCTAGATAATCAGTTCAGTGCATTTGCTGATACTGGTGGCAATGATAGGTTCTCTTCTGTGGAGAGGTTTGATTATACGTCAGGTCCCGTAGAGAGGGAAATATACACACCAAGGCTCATTAAAGTAACTTACATTGAAGGTTCAAATGACAGGAAGTGGAGTAGCAGGGATTTTCCTTGGACTAAGAAGCTGGAGGTTAACAACAAAAAGGTCTTTGGAAACCACTCTTTTCGACCCAATCAAAGAGAAGTGATCAATGCAACTATGAGTGGCCATGATGTCTTTGTTTTAATGCCAACTGGAGGAGGAAAAAGCCTAACATATCAGCTTCCCGCTTTGATTTGTCCAGGAATAACTTTAGTTGTTTCACCCCTTGTTTCTCTCATCCAAGATCAGATTATGCATCTTTTGCAGGCAAATATACCAGCTGCTTACTTGAGCGCTGCCATGGAATGGAGTGAACAACAGGAGATACTTAGAGAACTCTGTTCGGATAACTGCAGATATAAGCTCTTGTATGTAACGCCAGAAAAAGTTGCCAAAAGTGATGTTTTTCTACGGAATTTGGAGAAGTTGTATAGGTGTGAGTTGCTTGCCAGGATTGTTATTGATGAAGCTCATTGTGTTAGCCAATGGGGACATGATTTTAGGCCTGATTATCAGAGTCTTGGTATTTTAAAACAGAAGTTTCCAACCACACCGGTTTTGGCTTTAACTGCTACAGCAACAGCTGTTGTTAAGGAAGATGTAGTGCAAGCACTTGGTCTTGCCAATTGCATTATTTTTCGTCAAAGTTTCAACCGTCCAAATTTGTTATATTCAGTTATCCCTAAAACAAAAAGGTGTTTGGAGGAGATTAACAAGTTTATTAGAGAAAACCATTTTGATGAATGCGGAATTATCTATTGCCTTTCAAGAATGGACTGTGAAAAGGTTGCAGAGAAGTTACAGGAATTTGGACATAAAGCAGCTTTTTACCATGGAAGCATGGATACTGGTCAACGTGCCTTTGTTCAGAAGCAGTGGAGCAAAGATGAAATTAATATAATCTGTGCAACTGTGGCTTTTGGAATGGGTATCAACAAACCAGATGTTCGATTTGTGATTCATCACTCTATCCCGAAATCTATTGAAGGTTACCATCAGGAATGTGGTCGTGCTGGTAGAGATGGTCTGTCCTCATCTTGTGTTCTGTTCTACAGTTACAGTGATTATATTCGTGTCAAGCATATGCTCAGTCAAGGGGCAGCAGAGCAAACTCCATTCACCATTGGACAAAATCGCTTGAATTCTACGAGTTCAGGAAGGATAGTTGAAACTAACATGGAAAACCTTCTGCATATGGTCAGTTATTGCGAAAATGAAGTTGATTGCCGACGTCTCCTACAACTTGCCCACTTTGGAGAAAAGTTTGATTCCGGTAACTGTCAAAAAACATGTGACAACTGTTCCAAGGTTAAAATTTCTGTTGAGAAGGACATGAAGCATGTTGCAAAGCAACTGGTGGAGCTAGTGAAGTCAACAAGGCAGCAATTCTCTTCTGCCCACATCTTGGAAGTATTTAGGGGCTCTTTAAGCCAATATGTGAAGAAACACAAACATGAAACACTGAGCTTGCATGGAGTTGGGAAACATTTGGCTAAGGGTGAAGCATCTCGAGTATTGCGTCACCTAGTTGTTGAAGATATTCTAGTTGAGGAGGTCAAGAAAAGTGACATCTATGGATCAGTCTCATCTATCCTAAAGGTCAATGAACCCCGATGTAGAAATCTTTTCTGTGGCAGTCAAAGGATTATTTTAAGATTTCCGTCCTCTGCCAAATCTTCAGCCTTAAAATTGACGAAAGCTCAGGGAACACCAGCAAAGGACTGGCTTCCATCTGGGAAAGCAAATCCTCTACAAAGTCACACTTCTAACCCTCAATCACAAGCTGACCTGGATCTCTCTGCCAAATTATACTCTGCTCTTAGAGTGCTGAGGACTGCCATAATGAAAGAAAGTGGGGAAGGGGTCATGGCACATCACATATTTGGGAATGCTACATTGCACAGTATAAGCAAGAGGGTGCCTCGAACGAAAGAAGAATTACTTGATATCAATGGCATTGGCAAGGCAAAGGTGCTCAAGTATGGTGATCGTGTGCTTGAAACAATTGAAGCTATCATAAAGGAGCACTACAAGTCCCATAAAACCACCAGCAGCAGTAATGATAGTACAGAGTCAATAAAAAGGAGAAGAGATGCTGCCAAGCTTTCAAACGCAACCACCAATGAGGATGAAGACATGATGGGAAGCACTGGGAGATCGAAGAAAAGGGCTGTGAATAAAAATTTTGGAGTCGTTCAACCTTTGGAGATCGATGAATGCATAGATGATGCAGATATTGATTATGATGATTCATTTTTGGAGTTTCAGGGTGATTACTCAAATGTGAATGTTAATGGCAGAAAACTGCCTAAATGGTCAATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_167521.p1 GENE.S_Transcript_167521~~S_Transcript_167521.p1 ORF type:complete len:1219 (+),score=257.58,RQC|PF09382.6|1e+03,RQC|PF09382.6|1.5e+03,RQC|PF09382.6|2.1e-22,DEAD|PF00270.25|6.4e-19,Helicase_C|PF00271.27|1.4e+02,Helicase_C|PF00271.27|6.5e-17,HRDC|PF00570.19|5e-15,RecQ_Zn_bind|PF16124.1|2.4e-14 S_Transcript_167521:302-3958(+)
MSGRNMVAGVSKPNQKLPKVNLLEHVQSLNKSSSQGNKSLSSNFLFSLPSQKSHSEGVRMMGCQVQSIARSNLDQAWQALSSLQLGCRNYVRPGKTLPPVKDANAFQYTGTRVTLEASYDNKAKYIENQQEKHKLSESNGRCGDSVRFPSTVVQTYRVPEVGKPYNGESNREVSVSDSSHPQAVEGLCNKDAVFARDFKGPDEAVFDDINDDDILGNIDVDQIVMEHYQSSGTPQPTTSSKPIPVISDVDTNVRPDNTDIPAELCSTCNHGCKLGLCPEAANHLQEMKDMLIAISNELLDNMDLNPERMEELRQDRLRLNKQMQLLETHIKSSAMDIERQSSQFSASTANTHFQYQTPQAVFKTMNGYDTPEAVFKTMNGYDTPQAAGCRTVPMSLDNQFSAFADTGGNDRFSSVERFDYTSGPVEREIYTPRLIKVTYIEGSNDRKWSSRDFPWTKKLEVNNKKVFGNHSFRPNQREVINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVVSPLVSLIQDQIMHLLQANIPAAYLSAAMEWSEQQEILRELCSDNCRYKLLYVTPEKVAKSDVFLRNLEKLYRCELLARIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPTTPVLALTATATAVVKEDVVQALGLANCIIFRQSFNRPNLLYSVIPKTKRCLEEINKFIRENHFDECGIIYCLSRMDCEKVAEKLQEFGHKAAFYHGSMDTGQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSIPKSIEGYHQECGRAGRDGLSSSCVLFYSYSDYIRVKHMLSQGAAEQTPFTIGQNRLNSTSSGRIVETNMENLLHMVSYCENEVDCRRLLQLAHFGEKFDSGNCQKTCDNCSKVKISVEKDMKHVAKQLVELVKSTRQQFSSAHILEVFRGSLSQYVKKHKHETLSLHGVGKHLAKGEASRVLRHLVVEDILVEEVKKSDIYGSVSSILKVNEPRCRNLFCGSQRIILRFPSSAKSSALKLTKAQGTPAKDWLPSGKANPLQSHTSNPQSQADLDLSAKLYSALRVLRTAIMKESGEGVMAHHIFGNATLHSISKRVPRTKEELLDINGIGKAKVLKYGDRVLETIEAIIKEHYKSHKTTSSSNDSTESIKRRRDAAKLSNATTNEDEDMMGSTGRSKKRAVNKNFGVVQPLEIDECIDDADIDYDDSFLEFQGDYSNVNVNGRKLPKWSI*

Click here to download the sequence:
Link to NCBI Protein BLAST