Transcript Information: S_Transcript_167601.p1


Annotated TAIR IDAT4G15720.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8949569-8951419 | Forward length=616
E-Value4.8E-240
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34902296701876
Replicate 20.036168507471336
Replicate 30.15116996789837
Condition 2: 8 Hour
Replicate 10.38455621883355
Replicate 20.47677710215811
Replicate 30.55910419947492
Condition 3: 24 Hour
Replicate 10.07162256882162
Replicate 20.14861515787769
Replicate 30.082695227557758


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_167601.p1 GENE.S_Transcript_167601~~S_Transcript_167601.p1 ORF type:complete len:610 (+),score=86.16,PPR|PF01535.16|0.0032,PPR|PF01535.16|0.00041,PPR|PF01535.16|4.6e+02,PPR|PF01535.16|0.51,PPR|PF01535.16|5e-05,PPR|PF01535.16|4.6e+03,PPR|PF01535.16|2.5,PPR|PF01535.16|0.00075,PPR|PF01535.16|81,PPR|PF01535.16|0.058,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|0.053,PPR|PF01535.16|3.2e+03,PPR|PF01535.16|4.3e+03,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|7.2e-12,PPR_2|PF13041.2|14,PPR_2|PF13041.2|6.2e-05,PPR_2|PF13041.2|6.1e+03,PPR_2|PF13041.2|9.2e-06,PPR_2|PF13041.2|0.23,PPR_2|PF13041.2|0.017,PPR_2|PF13041.2|1.9e+02,PPR_2|PF13041.2|4.5e+03,DYW_deaminase|PF14432.2|8.4e+03,DYW_deaminase|PF14432.2|3.4e-33,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|59,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|6,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|8.9e+03,PPR_3|PF13812.2|0.081,PPR_3|PF13812.2|43,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|4.8,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|14,PPR_1|PF12854.3|2,PPR_1|PF12854.3|97,PPR_1|PF12854.3|0.094,PPR_1|PF12854.3|1e+04,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|5.3e+03,PPR_1|PF12854.3|2.2e-05,PPR_1|PF12854.3|4.9e+03 S_Transcript_167601:234-2063(+)
ATGAGAAAGCCATTAACCCGAAATCTCCACAAAATTACCATTGCAACATCCCGTCTAAATCGTCAAGGCAGAGAGTACCCTTTTCATCGTAGCACCCACCAATTCATTCAACAATTGCAAGACTCAAAAGATCCAAGCTTTGTGCTATCTACCCATGCCAAGCTTCTCCAATCTGGTTTTTTGATTAAAACCTTTCCCACTAACCATCTAATCAACGCTTACGTTAGATGTCAATACATGCGTAATGCACGCCAGTTGTTCGACGAAATGCCTGAACCAAATATTGTCTCTTGGACGTCTCTCATGGGGGGTTACGTTACAGATAAACAGCCCAAGATGGCTCTTTGGCTCTTTGCAAGAATGTCTAGAAGCATGGTATTGCCTAATGAGTTTACATTCTCTACTGTCATTAAAGCTTGCTCTGATCTTGCAGACTTAAAAATGGGCAAGTTAGTGCATGCTTGCCTTGAGATACTAGGTTATAAGAACGATCCTGTTGTGTCCACCTCATTGCTTGACATGTATGGAAAATCGAACAATCTGGTTGCTGCTCGACGAATATTCGATTCAATCTTTGAAAGGAATGTTGTGTCTTGGACTTCGATGATTACTGGGTATGCACAAAATGCTCAAGGATATGAGGCACTTGAACTTTTCAAGGAGTTCAACCGAACAGATAATAAATCCCCTAATCAATTTATGCTAGCCAGTGTTGTTAATGCATGTGCTAGCTTGGGGAGGTTGGTATATGGCAAAGCCACTCATGTGGCTGTTGTTAAAAGGGGCTACGGAGCCAATGAGGTTGTTGCCACTGCACTTACGGATATGTACGCCAAATGTGGATGTATAGACTTGTCTCTTGAGGTCTTTAGGAGCATCCGAAATCCTTGTGTGATACTATACACTTCTATGATTGTCTCTGCTGCTAAACACGGGCTAGCAGAAGTGTCTCTCGAGCTCTTTGAGGAGATGATTCACAAAGAAATACGACCTAATTCTGTCACATTGTTAGGCATCTTGTATGCTTGTAGCCATGCAGGGGTTGTTGACAAAGGCCTTGAGCACTTGCACTCGATGCACTCAAGACATGGTGTTTTTCCAGATGTGAAGCATTACACTTGCGTAATTGACATGCTCGGAAGAAGAGGCCGTTTAGATGAAGCTTACAAATTAGCAAAGACCGTTGATATACAACGAGATAATGACGGGGCTCTCGTATGGAGTGCTCTTCTTTCTGCTAGCAGGCTTCATGGAAGAGTGGATATAGCAACAGAAGCTAGTAAATGGTTAATTGAAACAAAGCAACAAGTGGATGCTGCCTATGTTGCAATGTCAAACACTTACGCAGTGGCAGGAAACTGGGATGATGCTCAGAGTATCCGTTTTGAAATGAAGCGTGTGGGGGTAAGGAAGGAGCGTGGATGCAGCTGGGTCGAGATTAAGGATTCGATTTATGAATTCTATGCTGGAGATATCTCATCGTGCCCGAGAAGCAGTGAGGTGCTATTTCTATTAAAAGACTTGGGTGAGAGGATGAAGGAAAGGGGATATGTCAGGGGAAGTACTGGGTTGGTCTTTGTTGATGTGGAAGAGGAATCCAGGGAGGAGATGGTTAGTTTGCACAGTGAGAGGCTGGCTTTGGCATTCAGTTTGATAACCATACCCAAAGGAGAAACCATCAGAATCATGAAGAACTTGAGAATGTGTCAAGATTGTCATGAAGCTTTTAAGCTAATCAGCAGCATTGTGGACAGGGATTTTGTTGTGAGAGATGTAAATAGATTTCATCATTTCAAAAATGGGTCTTGCAGTTGTCGAGATTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_167601.p1 GENE.S_Transcript_167601~~S_Transcript_167601.p1 ORF type:complete len:610 (+),score=86.16,PPR|PF01535.16|0.0032,PPR|PF01535.16|0.00041,PPR|PF01535.16|4.6e+02,PPR|PF01535.16|0.51,PPR|PF01535.16|5e-05,PPR|PF01535.16|4.6e+03,PPR|PF01535.16|2.5,PPR|PF01535.16|0.00075,PPR|PF01535.16|81,PPR|PF01535.16|0.058,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|0.053,PPR|PF01535.16|3.2e+03,PPR|PF01535.16|4.3e+03,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|7.2e-12,PPR_2|PF13041.2|14,PPR_2|PF13041.2|6.2e-05,PPR_2|PF13041.2|6.1e+03,PPR_2|PF13041.2|9.2e-06,PPR_2|PF13041.2|0.23,PPR_2|PF13041.2|0.017,PPR_2|PF13041.2|1.9e+02,PPR_2|PF13041.2|4.5e+03,DYW_deaminase|PF14432.2|8.4e+03,DYW_deaminase|PF14432.2|3.4e-33,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|59,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|6,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|8.9e+03,PPR_3|PF13812.2|0.081,PPR_3|PF13812.2|43,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|4.8,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|14,PPR_1|PF12854.3|2,PPR_1|PF12854.3|97,PPR_1|PF12854.3|0.094,PPR_1|PF12854.3|1e+04,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|5.3e+03,PPR_1|PF12854.3|2.2e-05,PPR_1|PF12854.3|4.9e+03 S_Transcript_167601:234-2063(+)
MRKPLTRNLHKITIATSRLNRQGREYPFHRSTHQFIQQLQDSKDPSFVLSTHAKLLQSGFLIKTFPTNHLINAYVRCQYMRNARQLFDEMPEPNIVSWTSLMGGYVTDKQPKMALWLFARMSRSMVLPNEFTFSTVIKACSDLADLKMGKLVHACLEILGYKNDPVVSTSLLDMYGKSNNLVAARRIFDSIFERNVVSWTSMITGYAQNAQGYEALELFKEFNRTDNKSPNQFMLASVVNACASLGRLVYGKATHVAVVKRGYGANEVVATALTDMYAKCGCIDLSLEVFRSIRNPCVILYTSMIVSAAKHGLAEVSLELFEEMIHKEIRPNSVTLLGILYACSHAGVVDKGLEHLHSMHSRHGVFPDVKHYTCVIDMLGRRGRLDEAYKLAKTVDIQRDNDGALVWSALLSASRLHGRVDIATEASKWLIETKQQVDAAYVAMSNTYAVAGNWDDAQSIRFEMKRVGVRKERGCSWVEIKDSIYEFYAGDISSCPRSSEVLFLLKDLGERMKERGYVRGSTGLVFVDVEEESREEMVSLHSERLALAFSLITIPKGETIRIMKNLRMCQDCHEAFKLISSIVDRDFVVRDVNRFHHFKNGSCSCRDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST