Transcript Information: S_Transcript_16800.p1


Annotated TAIR IDAT1G65260.1
Annotated Gene Nameplastid transcriptionally active 4
Annotated Gene Symbol(s)PTAC4, VIPP1
Annotation TypeOrtholog
Chromosome Positionchr1:24236329-24240428 | Forward length=330
E-Value8.5E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51178848529193
Replicate 21.4849954509866
Replicate 32.6600100120578
Condition 2: 8 Hour
Replicate 11.435362809807
Replicate 21.2906835753688
Replicate 31.4347205118737
Condition 3: 24 Hour
Replicate 12.7306104363243
Replicate 21.7433701212575
Replicate 32.425196577415


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16800.p1 GENE.S_Transcript_16800~~S_Transcript_16800.p1 ORF type:5prime_partial len:104 (+),score=36.34,PspA_IM30|PF04012.8|5.9e-17 S_Transcript_16800:1-312(+)
CGTGAAGCTTTGAAGAGGCGCAAATCTTATGCTGATAATGCTAATGCCTTGAAAGCCCAGCTTGATCAGCAAAAGGGTGTTGTTGAATCTCTTGTCTCAAATACTAAGCTTTTGGAAAGCAAGATACAAGAGGCAAAGTCAAAGAAAGATACACTAAAAGCACGTGCTCAGTCTGCAAGGACTGCTACCAAAGTAAGTGAGATGGTGGGGAAAGTGAATACTAGTGGTGCTCTTGCTGCTTTTGAGAAAATGGAAGAAAAAGGCAAGCAATCTCTTCTCATTTTTAGTTTTGTGTTTTGTGATTATGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16800.p1 GENE.S_Transcript_16800~~S_Transcript_16800.p1 ORF type:5prime_partial len:104 (+),score=36.34,PspA_IM30|PF04012.8|5.9e-17 S_Transcript_16800:1-312(+)
REALKRRKSYADNANALKAQLDQQKGVVESLVSNTKLLESKIQEAKSKKDTLKARAQSARTATKVSEMVGKVNTSGALAAFEKMEEKGKQSLLIFSFVFCDYD*

Click here to download the sequence:
Link to NCBI Protein BLAST